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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1177.1_65865
Locus scaffold1177.1 : 50446 ... 54004 : +
To GenomeBrowser scaffold1177.1:50446..54004
Genes list of scaffold scaffold1177.1
Synonym pfu_aug2.0_1389.1_31659

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1177.1_65865.t1 1 1 DUF4511 2 71 6.1e-27 93.4 4.8e-31 7.2e-27 93.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1177.1_65865.t1 gi|115918036|ref|XP_791395.2| 2.0e-15

Transcript
Transcript IDpfu_aug1.0_1177.1_65865.t1
Definition-
>pfu_aug1.0_1177.1_65865.t1
atggctggtaacgacatgctgagatccatgcagattgtgttccctgtagctacacagattcagatggacattattgacag
atatggtttcccagctgatggtgatggtttaatacggtttactcaagcagttaaggtatatgaaaaacaagacgaggaga
ttgcacagttaaattacgaactgcgtactacgatgatacctgcattaacggtacaggtgccaaatggtgaacaagatggg
acctag

Protein
Protein IDpfu_aug1.0_1177.1_65865.t1
Definition-
>pfu_aug1.0_1177.1_65865.t1
MAGNDMLRSMQIVFPVATQIQMDIIDRYGFPADGDGLIRFTQAVKVYEKQDEEIAQLNYELRTTMIPALTVQVPNGEQDG
T

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