Gene
| Gene Model ID | pfu_aug1.0_1177.1_65866 |
|---|---|
| Locus | scaffold1177.1 : 54449 ... 60235 : - |
| To GenomeBrowser | scaffold1177.1:54449..60235 |
| Genes list of scaffold | scaffold1177.1 |
| Synonym | pfu_aug2.0_1389.1_31660 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1177.1_65866.t1 | 1 | 1 | HSP70 | 38 | 643 | 0.0 | 893.5 | 0.0 | 0.0 | 893.3 |
| pfu_aug1.0_1177.1_65866.t1 | 2 | 1 | MreB_Mbl | 38 | 98 | 2.2e-18 | 65.9 | 0.0067 | 13.0 | 4.3 |
| pfu_aug1.0_1177.1_65866.t1 | 2 | 2 | MreB_Mbl | 170 | 405 | 2.2e-18 | 65.9 | 8.1e-20 | 1.5e-16 | 59.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1177.1_65866.t1 | gi|46359618|dbj|BAD15288.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1177.1_65866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1177.1_65866.t1 atgaagagattgatgtatggagtggttatagcactgcttgtcagtgcctccttcgtatcgtgtaaagacgaggacgagga gaaagaaaagaagaaggagagtgtaggaactgtcataggaatagatctgggtaccacttactcatgtgttggagtgttca agaatgggcgagttgaaatcattgctaatgaccaaggtaaccgtattacaccatcctatgtagccttcaccagcgaagga gagagattgattggagattctgctaaaaaccagcttacctcaaaccctgagaacaccatatttgatgtgaagagattgat tggacgtacatgggacgacaagagtgtacagagcgatattaagtactatccgttcactgtcaagaacaaggccaacaagc cccacctggtggtcaacactggatcaggggagaaaacttttgctccggaggaaatctctgctatggtacttggcaaaatg agggaggtagctgaggaattcttgggaaagaaaatcaacaatgccgtcattacagtcccagcttactttaatgatgctca gagacaagccacaaaagatgctggaaccattgcaggccttaatgttatgagaatcatcaatgaacctactgctgcagcta ttgcatacggattggacaagaaggaaggagagaagaacatattggtctttgatcttggaggtggtacttttgacgtgtca ttgctgaccattgacaatggtgtgtttgaggtcgtatccaccaacggtgacacccatcttggaggtgaggactttgatca gcgtgtaatggagcacttcatcaaactgtacaagaagaagaagggcaaggacatcaggaaagacaaccgtgccgtacaga aactccgacgtgaagtagaaaaggcaaagagaggtctctccactcagcatcaggccagaattgaaattgaatccctgtac gatggcgaagacttctctgagactctcactcgtgccagatttgaggaactgaacatggacttattccgatcaacaatgaa gccagtcaagcaggtgctcgatgatgctgatcttaaaaaggaagacattgacgagattgtacttgttggtggatctacca gaattccaaaaattcaacagcttgtcaaagaattcttcaacggcaaggaaccaaaccgtggtgtaaaccctgatgaagct gtggctttcggtgctgccgtacaagcaggtgtactcggaggagaggaagacactggtgatctcttactgctcgacgtcaa cccactgacccttggaatcgaaacggttggaggtgtcatgaccaaacttatcccaagaaacaccgtcattcctaccaaaa aatcacaaatcttctccactgccgctgataaccagccaactgtaaccatccaggtctttgagggagaacgatccatgaca aaggataaccataaccttggaaaattcgaccttactggaattccacccgccccaagaggtgtgcctcaaatcgaggtcac attcgagattgacgtaaacggcatcttaaaagtcagtgcagaggacaaaggaacaggcagcaaaaatcatattgttatcc agaatgataataacaggctgtctccagaagatattgagcgcatgataaatgacgctgaaaaattcgctgatgaagataag aaagttaaagataaagttgacgctaaaaacgaattagaaagctatgcatattcacttaaaaatcaattaggagataaaga aaaattaggtggtaaacttagtgacgatgataagaagaaagtagaagaagctgtagatgagaaaattaagtggttagaaa gtaacgctgatgccgatgttgacgatttaaaagcacaaaagaaagaacttgaagaagttgttcaaccaattatgagcaaa ctttaccaaggtgcaggaggggcacctccccctggtggtgatggggcggaccagggatctaaagacgaagatcacgacga attataa |
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Protein
| Protein ID | pfu_aug1.0_1177.1_65866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1177.1_65866.t1 MKRLMYGVVIALLVSASFVSCKDEDEEKEKKKESVGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTSEG ERLIGDSAKNQLTSNPENTIFDVKRLIGRTWDDKSVQSDIKYYPFTVKNKANKPHLVVNTGSGEKTFAPEEISAMVLGKM REVAEEFLGKKINNAVITVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKEGEKNILVFDLGGGTFDVS LLTIDNGVFEVVSTNGDTHLGGEDFDQRVMEHFIKLYKKKKGKDIRKDNRAVQKLRREVEKAKRGLSTQHQARIEIESLY DGEDFSETLTRARFEELNMDLFRSTMKPVKQVLDDADLKKEDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPNRGVNPDEA VAFGAAVQAGVLGGEEDTGDLLLLDVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVFEGERSMT KDNHNLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILKVSAEDKGTGSKNHIVIQNDNNRLSPEDIERMINDAEKFADEDK KVKDKVDAKNELESYAYSLKNQLGDKEKLGGKLSDDDKKKVEEAVDEKIKWLESNADADVDDLKAQKKELEEVVQPIMSK LYQGAGGAPPPGGDGADQGSKDEDHDEL |
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