Gene
| Gene Model ID | pfu_aug1.0_11795.1_10370 |
|---|---|
| Locus | scaffold11795.1 : 19242 ... 34895 : - |
| To GenomeBrowser | scaffold11795.1:19242..34895 |
| Genes list of scaffold | scaffold11795.1 |
| Synonym | pfu_aug2.0_547.1_24168 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11795.1_10370.t1 | 2 | 1 | Glyco_transf_7N | 67 | 91 | 0.0 | 158.5 | 0.17 | 830.0 | -0.7 |
| pfu_aug1.0_11795.1_10370.t1 | 2 | 2 | Glyco_transf_7N | 100 | 225 | 0.0 | 158.5 | 0.0 | 0.0 | 158.5 |
| pfu_aug1.0_11795.1_10370.t1 | 2 | 1 | Glyco_tranf_2_2 | 178 | 247 | 2.6e-08 | 33.3 | 3.2e-07 | 0.0016 | 17.6 |
| pfu_aug1.0_11795.1_10370.t1 | 1 | 1 | Glyco_transf_7C | 228 | 279 | 2.1e-19 | 68.7 | 8.4e-23 | 4.1e-19 | 67.8 |
| pfu_aug1.0_11795.1_10370.t1 | 2 | 2 | Glyco_tranf_2_2 | 247 | 278 | 2.6e-08 | 33.3 | 2.0e-06 | 0.01 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11795.1_10370.t1 | gi|260781506|ref|XP_002585849.1| | hypothetical protein BRAFLDRAFT_155899 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_11795.1_10370.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11795.1_10370.t1 atgctaagtgttctcagagtttttgatattctaactaatcaaagggagggtggtgaaaaacaatattcacatgtcagtca gaggactgcggtcggcagagttctctcctcgctgttcacgacatacaagaagagtttcctcctcctggtgaccatcacgt acacagttctcgtccttttctcgttattcaactataaacaacattgtatcttcacccatcctgagactctactacattac gacctgctgccgcatgataaagcttatgaatattgccagattaattggaataacctaggtgttcgacatgttgaaatgtt tcgagatctcagcgagaaggagctgatcgatcgatacccgtttgtcagggagggcgggaaatggaaacctgaaaaatgta gatccgtccaaaaagtcgcaataatcattccgtacagagacaggggacaccatttacgtttattactcaataggttacac ccaatgctgaggtcccagctcatacagtatagaatttttgttgtcgaacagggtggaaaagaaaacttcaatagaggaaa attaatgaatgtaggatttaacgaggctcttaattacgagaattttgattgcttcatcttccatgacgttgatatgctgc cagaaaatgatcagaatctatatatctgtgatgaaaatctacgtcagctatcctccgccattgatgaaatgagatatcat gttatgtattataactatgctggaggagtgatagcaatgaaaagagaggtcttcagaaaaataaacggctatgcaaacac gtactggggctggggaaacgaagatgatgacatatcagcaagttccaacaaatcaattgattag |
|
Protein
| Protein ID | pfu_aug1.0_11795.1_10370.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11795.1_10370.t1 MLSVLRVFDILTNQREGGEKQYSHVSQRTAVGRVLSSLFTTYKKSFLLLVTITYTVLVLFSLFNYKQHCIFTHPETLLHY DLLPHDKAYEYCQINWNNLGVRHVEMFRDLSEKELIDRYPFVREGGKWKPEKCRSVQKVAIIIPYRDRGHHLRLLLNRLH PMLRSQLIQYRIFVVEQGGKENFNRGKLMNVGFNEALNYENFDCFIFHDVDMLPENDQNLYICDENLRQLSSAIDEMRYH VMYYNYAGGVIAMKREVFRKINGYANTYWGWGNEDDDISASSNKSID |
|