Gene
| Gene Model ID | pfu_aug1.0_1182.1_51219 |
|---|---|
| Locus | scaffold1182.1 : 5076 ... 26461 : + |
| To GenomeBrowser | scaffold1182.1:5076..26461 |
| Genes list of scaffold | scaffold1182.1 |
| Synonym | pfu_aug2.0_2495.1_18838 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1182.1_51219.t1 | 2 | 1 | AAA_11 | 157 | 249 | 5.6e-40 | 137.3 | 0.49 | 600.0 | -0.2 |
| pfu_aug1.0_1182.1_51219.t1 | 1 | 1 | RNB | 374 | 452 | 2.2e-20 | 73.1 | 5.1e-23 | 6.2e-20 | 71.7 |
| pfu_aug1.0_1182.1_51219.t1 | 2 | 1 | AAA_30 | 605 | 637 | 3.4e-10 | 39.8 | 5.2e-07 | 0.00065 | 19.3 |
| pfu_aug1.0_1182.1_51219.t1 | 2 | 2 | AAA_11 | 605 | 842 | 5.6e-40 | 137.3 | 4.49817e-43 | 5.6e-40 | 137.3 |
| pfu_aug1.0_1182.1_51219.t1 | 2 | 1 | AAA_19 | 610 | 672 | 7.0e-09 | 35.3 | 1.6e-10 | 2.0e-07 | 30.6 |
| pfu_aug1.0_1182.1_51219.t1 | 2 | 2 | AAA_30 | 801 | 838 | 3.4e-10 | 39.8 | 1.5e-06 | 0.0018 | 17.8 |
| pfu_aug1.0_1182.1_51219.t1 | 1 | 1 | AAA_12 | 850 | 1015 | 2.2e-35 | 121.8 | 4.5e-38 | 5.5e-35 | 120.5 |
| pfu_aug1.0_1182.1_51219.t1 | 2 | 2 | AAA_19 | 946 | 982 | 7.0e-09 | 35.3 | 0.17 | 200.0 | 1.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1182.1_51219.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1182.1_51219.t1 atggaagtagtacaaccagaaccagaacctgctaagaaaaaggaagaagcaaaagatggcagaagagcagcaaatttgaa aaccagtagaacttctgcagaggaaagtaatggtttacatcgagaaaaaggagttcttccagttccgcagaatgcagaga aggatgattatgatattcagaattttgaaaaagacgatggcatggatgatacaccatttctacttgatgaagatgatgct cagactgacttgcattcggcagaagatcttgtcagtattcatgatcaggtttcaagattaatgataaagggtatttcact caaaagtcaatgtgtaaggtcattagctcagggtaactacaagtatgatgattacaatgaagacgaagtcactgatgcag aagatgatttactggaaaggcagccgaaaaagtttaagcgatgtattattcaaatcgaatctgcacataaagcaatttgc acaaatatggattcagctgatgaaatcaaagagatagaaatatcaggaagaagtaagtgtggaaaaagcttcagtgagga tgaagtgctggttgaaatacttaaagaagaaggaaagaatcagaaagataactttataccaaggttgtccaaaaggccca atcaacagacaaaacaatgcaaagtttatggtgctgtgaagagaacacttaaaagaaatagattttccgacgtcagtcat cctgttctagtatgtgtagtggatgaattcgaatgccatctgatgaaacctctttgtagaacaattccaaaattgtatgt acagaaacggggtgccaaagaaggtttcacagtagatatctacgagtacactcagagccggaagaccgtcacattcaagg aaaatatatcagtaccgtatgctgatcgccactcttttgttttccttgttgcatacatcaaatgggatagatactatccc agaggagtagtccttcgctgcattcgtacatcaggatctttaatgaatggaataagtttgctaaagctaatacatagggt accgggtcagtgcgaagaatcagtgctgaaggttgctacaagtacggcttccaatgaaacactgaatgctgatgaaaata ggaccgacttgtctggattagagactttcaccatagatccaaaagattcaactgatttggacgatgcgcttagtatagag aaattaccgaacgggttgtatcaagttggagtgcatatagctgacgtatcgtcagatattcagaaagacagcactattga caaggcagcacaggaacgtttggtcacgttttacaccggacttgggtttgaagcaaatcatatgttgccaaatgatgaag aaattgagtatgtcccaagttcagactatctttgtattcgttgtgacattcaagatggcgaaatgccgggtcagcgtgtt gatgaagcgtgcacaccatataagagaatggtttggattggtcacggaaagaatgacaaaataaagcgaatgaagaagag aggcaaagttgcagtacattttcagcttaggaaaaatagtatgatgccaactccgaaaatgcaaaataataataaacctg taagatgctgtgtagagttacttcaaaaggcggaggtggaaaggagatctgacgctatcttgcaataccttcccaaagga tcccagctagctatggctatagcacttggaaggaagccttcgcaaatgtcgaaacaacatcttgattttgttaagtctgt cggtacagagccagaaatgttcatgacaaaacaatcaaagtaccccagaaacaatccaaagcaggctgaagctataagaa atgctcttgaacagagtttcagtcttattcagggcccaccaggaacggggaaaacgtacacaggagttaaacttattcac ctgttctgcacaatgaatagactagccagggaggctggattgacacaaagacaacttgtattttgtggaccgtcaaacaa gtccgtggacttggtagcaaaatggattttaaaagacaaagccccgtgcatggttcgagtctatggtagctcgatggaaa acatggactttccaattcctgggaaagtatttccaaaaaaggcacgatctagagatgggaaaccagatcgaaagttacaa gaagtatcgctccatcacctcattagggccgaccataatcaacatgcaaaagagattcgacgctacgataagctatttag agaaaaccctgctttctccgacatagatgaaattaagaagtacaaatcgctcttgagcaaagctgtgcaagaggaactga cattgtatgatgttatcttctgcacaacagcaatggcgaccaatcacaagtttctgaaagggaccaaaggtaaaatatac caattgattattgacgaagcaggaatgtgcacagaacctgaatgtgttgctccaattatagccactcaggctaagcaagt tgtgttgattggagaccacaaacagctaaggccgaccatcatgtgtcagtatgcaacagacttgggtctggctagatccc ttttcgaacgctatgcaaacaaggctattttgctcaatatgcaatacaggatgcacccaaaaatctgtgaatttccgtcc caaacgttttacaaaggaaaactcaagacagatatgaaatatacatctgtgtggtacgaaatggatccccttcgagtttg gccagtatttggtacaccgcacgtgttctgccatgttgttggagcggaagaacatttaacagtagctaccgaggaaggca acgagctttctcgcagcaacaaagctgaagttgaagtagtggtgaagatagtcgctcatctgttggacatcgagagggtg aaccaggagaaaattaatatcatgtctcagtacaatgctcaatgttacagcctgaaggacagtctgagagagaatggtct aatcaatctcaatatcaacactgtcgtagctagtcaaggtggagagtgggattacgtcatttttagcacagttcgatcat tgcctcagtacagaatcgaaccaaggccgtcactagtgatcctcaattctaaacaatgcgatatgccaaaaaagtatgaa atttactatgtcgaaaaagcgtaccgaaagaagtag |
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Protein
| Protein ID | pfu_aug1.0_1182.1_51219.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1182.1_51219.t1 MEVVQPEPEPAKKKEEAKDGRRAANLKTSRTSAEESNGLHREKGVLPVPQNAEKDDYDIQNFEKDDGMDDTPFLLDEDDA QTDLHSAEDLVSIHDQVSRLMIKGISLKSQCVRSLAQGNYKYDDYNEDEVTDAEDDLLERQPKKFKRCIIQIESAHKAIC TNMDSADEIKEIEISGRSKCGKSFSEDEVLVEILKEEGKNQKDNFIPRLSKRPNQQTKQCKVYGAVKRTLKRNRFSDVSH PVLVCVVDEFECHLMKPLCRTIPKLYVQKRGAKEGFTVDIYEYTQSRKTVTFKENISVPYADRHSFVFLVAYIKWDRYYP RGVVLRCIRTSGSLMNGISLLKLIHRVPGQCEESVLKVATSTASNETLNADENRTDLSGLETFTIDPKDSTDLDDALSIE KLPNGLYQVGVHIADVSSDIQKDSTIDKAAQERLVTFYTGLGFEANHMLPNDEEIEYVPSSDYLCIRCDIQDGEMPGQRV DEACTPYKRMVWIGHGKNDKIKRMKKRGKVAVHFQLRKNSMMPTPKMQNNNKPVRCCVELLQKAEVERRSDAILQYLPKG SQLAMAIALGRKPSQMSKQHLDFVKSVGTEPEMFMTKQSKYPRNNPKQAEAIRNALEQSFSLIQGPPGTGKTYTGVKLIH LFCTMNRLAREAGLTQRQLVFCGPSNKSVDLVAKWILKDKAPCMVRVYGSSMENMDFPIPGKVFPKKARSRDGKPDRKLQ EVSLHHLIRADHNQHAKEIRRYDKLFRENPAFSDIDEIKKYKSLLSKAVQEELTLYDVIFCTTAMATNHKFLKGTKGKIY QLIIDEAGMCTEPECVAPIIATQAKQVVLIGDHKQLRPTIMCQYATDLGLARSLFERYANKAILLNMQYRMHPKICEFPS QTFYKGKLKTDMKYTSVWYEMDPLRVWPVFGTPHVFCHVVGAEEHLTVATEEGNELSRSNKAEVEVVVKIVAHLLDIERV NQEKINIMSQYNAQCYSLKDSLRENGLINLNINTVVASQGGEWDYVIFSTVRSLPQYRIEPRPSLVILNSKQCDMPKKYE IYYVEKAYRKK |
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