Gene
| Gene Model ID | pfu_aug1.0_1182.1_51220 |
|---|---|
| Locus | scaffold1182.1 : 28328 ... 45455 : - |
| To GenomeBrowser | scaffold1182.1:28328..45455 |
| Genes list of scaffold | scaffold1182.1 |
| Synonym | pfu_aug2.0_772.1_07868 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1182.1_51220.t1 | 3 | 1 | RNB | 373 | 470 | 0.0 | 181.7 | 1.3e-31 | 6.3e-28 | 97.9 |
| pfu_aug1.0_1182.1_51220.t1 | 3 | 2 | RNB | 471 | 716 | 0.0 | 181.7 | 3.6e-28 | 1.8e-24 | 86.6 |
| pfu_aug1.0_1182.1_51220.t1 | 3 | 1 | AAA_11 | 717 | 774 | 1.3e-21 | 77.3 | 0.14 | 690.0 | -0.4 |
| pfu_aug1.0_1182.1_51220.t1 | 3 | 2 | AAA_11 | 1080 | 1145 | 1.3e-21 | 77.3 | 0.12 | 600.0 | -0.2 |
| pfu_aug1.0_1182.1_51220.t1 | 3 | 3 | AAA_11 | 1241 | 1471 | 1.3e-21 | 77.3 | 3.6e-24 | 1.8e-20 | 73.5 |
| pfu_aug1.0_1182.1_51220.t1 | 3 | 3 | RNB | 1347 | 1399 | 0.0 | 181.7 | 0.36 | 1800.0 | -2.1 |
Transcript
| Transcript ID | pfu_aug1.0_1182.1_51220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1182.1_51220.t1 atgtttaagtttgtgctctattcattctacgaagaagccagtgtccgatcaatatctgattcacaaaacaatcgagataa cgatgacagtgaaaatgatattgaaatactttacaagagatcggatgatgatatagagtcggattctgacatgtccgatt ctggttcttcagtaacatttaatgatggaatttccgataacatttatgctgaaaatgtgtcagtacaggaagatggagag aacaaatttgaagttagttctcaattccataaaaggtcatccaattcaacgttgctcgattacgaaaaattaaagaaagg aatcgaatttaataaaacatttgttgaaagttttaaaaacaaaagattctacgaacctttactctcaaagacggaaataa gatcaaaacttttgaaaaatccaaagaagtttaaaaaatgtcagatacgaatcgaaggagcacataaagcactatgcagg aacctagatccaaaagatgaggtgtcagaaatcgaaatctccggcagatcgaaatgcagagaagtatttaatggggacat tgtggttgtgaagatattgaacttcaagagagttgctaatacgattataccaagattgaaaaaggatataaatgaaaata acagaagaaacaaaatttatggcgaagtcatcggacgtttaaagagaaaaacagaaatcaaaaatccagttatggtttgc agtcttgatgaatcgtcaaactacctcgtgaaacttttatgtaaaacggtacctaaattgaaacttctggaggaaacaga cagcgattttcaggtttctgtctattcatacaatgagacatcaaaagacttagattggaaagaaaacattgaaataaatc cagcttcacgatctaaatatgtatttctaaccgcttatatttgttggagcggtcagtatcctattgcagctgtcataaaa gttttcaagtctagtgatgacatttcatcggcacttcggaatctactacttgtccacaaggtgcctacgctctaccaaga gaccacaacaaaacacactgcaaagctacttcaagaatccaatgaaggggtttctcaatttttctctgcaagtgatcgat tggatttatcaaatactctacgaacgtacactattgatcctccaagttctttagatctcgatgatgctcttagcgtagaa attgatagagatagtaattatactgttggagtacatatagcagatgtatctgtggttgtgaaaaaagacgatcctgtcga cagagaggcccgtgaaagagttacaacattctatcctgggatggaaaaacatccttaccatatgcttcctgaaccaatat caacaaacatatgtagtcttcttccaaatgaaagacgaccaactatatcgaaattttcttacgaagaagtgcaaggaata attgacgcagaaaatcctcaaaacgacatcgaaaaggatataaaacttcttgcaatgctttcagtattaagaagaaaaat aagactacaagacgcctttcattcgtatccaattgagtacctggatgactcaactctgctttcattagatgcccatcgtt tggtagaggaatttatgattcttgcaaatttcagtgtcggtttgttcttaatctcccacaagcaagtgcgacacaatgta atcttgcgatgtcaggaccgtccctctcagaagcaaattcaagtttgggagaaaaataacaaaaagcatatcatcgacat ggtgttaagaatgcaatgtatgacatgcaaatcaggtgagggcgaaaggatctctatcaacaatgtgaataatgttcgat ggcggaatattctatcaactcaaaattgggtttggaaagatattgaaaaggcattcaaggaaaaggatcttccaaaaatg agaaaaatgataggaacagatgaacttcatcctttacagtgcttagcattggaagaatggaaggattttcaagaaaatgc agagtatcgatgtcatggatatatgaaggaacctaatagggaaggattccacttctcgctgggaatgtacccttatgttc attttacttctcccatcagacgatacacagacttgattgttcatcgtttagttcatgtcgttttgaagggaccagtagaa atatgcaagtactcaacagacgaagtgcaggaactgtgcctccatgtgacggaagtatctcgacaagctaggacttacca aaacagttgccaaacattactaactgggcatcgtttcctgtcaaaggcgtatttaattaatgcctttgttaaggaatttt ccgagtctaaaattattttttcctacccaaccataaaaaacgtcccatctaaatacaaagaaataccattgtccctgttg catacgtcatctgctgcttcagttaaaagatcctatgataaaaatataatgacattgacatggaagcgtcgaatatacca caggaatggcaccaaaagtgttatgaacaacccatatcttggcaactttggtcttttgaagaaagttaatcctcatattc gatcggaatgtgtccagattatgaaatggcgggatcttctgaaagcaagtatggaagataactgggaaagaatatgtgaa ataatgacagagacggaaggaagagaagaaacggaatacatgaggatcgaaaacaagttagtttggacatacgtcgagga atgtattaacactgactttgatgtttcatctgaaactcctgatggagacttgatgcatcaatgctgtcatcacagtatgt catttgatcgaggacaaatagtgagcatccagttatcctctgttgtagatagaggatcattaacactttctcctcaattg ataaacatatcacagaattctagactttgtttgcagcatatgcaagatccagttcaatttctgtccagatattcaacagt gagaacaaaatcagacaaatataagaacgtttatgaataccttcaaatatggcttccgattcttgaaatggaattcgcat ctagagccgttgtggaagattcgcctactattaatgctgttccagttcgtttttatgaaaagggaggtgagtttgaactt aggaaatggttttgtgaagaaagggatatagactttttcatgatgccatcgactcttattcttaacggcaaagaaatcaa agaagaagacgaagaggcagaagagattgaaaatactgatttcatttgtattaagtgcgacataccggagggacgaacac ccggaaattcaatacgatcagatactcttaaccaaggagactacatatgggttggtcatgcgcaaataagaaaggtaaat attatgaagaaagaaagacgcattgaatctgagaagagtaaagaaagtcaaaatgaagaatcacaagaaaacaagaaaca atggacaaaaacatatcacattcaatttgatcttctggaagatggtcgtctccctctacagatgcggcaacaaagctttg agccgaaatgctgtattgagctgattcaaaaatctacatcagacaagaggattgaggcgattttaaagtgcttgccagat gctattcctcttgcaaaggccatcgcactcggaacgaaaatacaaaaattgagcgaagaccatatttccgctgcagagaa gatcaacgttaataaaccgatgggtaatcttcaaagaaataatacacgtcagagggaagcacttgagaaagccttacgga aaagctttagtttgatccatgggcctccagaaatgttcagaagaaagttccctgcatcggagttgagacttgttcgcctc tatggaacttccattgaaaatcaagactaccctgttcccggtagacatatctccgaatcgtcttctgcgaaaagctcaaa accagatccagagctgtcggacatatccatgcataaactaatccgtggatcagaaacggaattaagtgacgccataaaag gatatgatagaaaatttgaggatcacttcaaggcacaggagcgaaaaaaagacaaagtgaagaacattttgaagcatgcg caaaagcaagagaaaaaagaatttttcactgaaatgtgtaataaaaggtctggcaaaaaagtttctgtacttcaagacat acgcacttacaataaacttattacgaaagcgaccataaaggagttacagaattttgatgtgattttttgcactacttccg ttgctactagtccaaggtgtttacgggcagtacacggacgtgtttctcagcttattatagacgagtgtggcatgtgcaca gaaacagaaagtatggccaccatcatagcaacgaagccaaaacaagttgtgttgatcggggaccataaacagttacagcc atttgttacctgtagggaagctggagatttagggctagaaaaatctttatttgagagatatgctaagaaatcagcattca cttttctgaatctacaatacagaatggtatttacacgatttgtagatgtacaagccttaattccaaattctccattttcc attgtttggatataa |
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Protein
| Protein ID | pfu_aug1.0_1182.1_51220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1182.1_51220.t1 MFKFVLYSFYEEASVRSISDSQNNRDNDDSENDIEILYKRSDDDIESDSDMSDSGSSVTFNDGISDNIYAENVSVQEDGE NKFEVSSQFHKRSSNSTLLDYEKLKKGIEFNKTFVESFKNKRFYEPLLSKTEIRSKLLKNPKKFKKCQIRIEGAHKALCR NLDPKDEVSEIEISGRSKCREVFNGDIVVVKILNFKRVANTIIPRLKKDINENNRRNKIYGEVIGRLKRKTEIKNPVMVC SLDESSNYLVKLLCKTVPKLKLLEETDSDFQVSVYSYNETSKDLDWKENIEINPASRSKYVFLTAYICWSGQYPIAAVIK VFKSSDDISSALRNLLLVHKVPTLYQETTTKHTAKLLQESNEGVSQFFSASDRLDLSNTLRTYTIDPPSSLDLDDALSVE IDRDSNYTVGVHIADVSVVVKKDDPVDREARERVTTFYPGMEKHPYHMLPEPISTNICSLLPNERRPTISKFSYEEVQGI IDAENPQNDIEKDIKLLAMLSVLRRKIRLQDAFHSYPIEYLDDSTLLSLDAHRLVEEFMILANFSVGLFLISHKQVRHNV ILRCQDRPSQKQIQVWEKNNKKHIIDMVLRMQCMTCKSGEGERISINNVNNVRWRNILSTQNWVWKDIEKAFKEKDLPKM RKMIGTDELHPLQCLALEEWKDFQENAEYRCHGYMKEPNREGFHFSLGMYPYVHFTSPIRRYTDLIVHRLVHVVLKGPVE ICKYSTDEVQELCLHVTEVSRQARTYQNSCQTLLTGHRFLSKAYLINAFVKEFSESKIIFSYPTIKNVPSKYKEIPLSLL HTSSAASVKRSYDKNIMTLTWKRRIYHRNGTKSVMNNPYLGNFGLLKKVNPHIRSECVQIMKWRDLLKASMEDNWERICE IMTETEGREETEYMRIENKLVWTYVEECINTDFDVSSETPDGDLMHQCCHHSMSFDRGQIVSIQLSSVVDRGSLTLSPQL INISQNSRLCLQHMQDPVQFLSRYSTVRTKSDKYKNVYEYLQIWLPILEMEFASRAVVEDSPTINAVPVRFYEKGGEFEL RKWFCEERDIDFFMMPSTLILNGKEIKEEDEEAEEIENTDFICIKCDIPEGRTPGNSIRSDTLNQGDYIWVGHAQIRKVN IMKKERRIESEKSKESQNEESQENKKQWTKTYHIQFDLLEDGRLPLQMRQQSFEPKCCIELIQKSTSDKRIEAILKCLPD AIPLAKAIALGTKIQKLSEDHISAAEKINVNKPMGNLQRNNTRQREALEKALRKSFSLIHGPPEMFRRKFPASELRLVRL YGTSIENQDYPVPGRHISESSSAKSSKPDPELSDISMHKLIRGSETELSDAIKGYDRKFEDHFKAQERKKDKVKNILKHA QKQEKKEFFTEMCNKRSGKKVSVLQDIRTYNKLITKATIKELQNFDVIFCTTSVATSPRCLRAVHGRVSQLIIDECGMCT ETESMATIIATKPKQVVLIGDHKQLQPFVTCREAGDLGLEKSLFERYAKKSAFTFLNLQYRMVFTRFVDVQALIPNSPFS IVWI |
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