Gene
| Gene Model ID | pfu_aug1.0_11829.1_03134 |
|---|---|
| Locus | scaffold11829.1 : 22216 ... 29212 : + |
| To GenomeBrowser | scaffold11829.1:22216..29212 |
| Genes list of scaffold | scaffold11829.1 |
| Synonym | pfu_aug2.0_188.1_27015 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11829.1_03134.t1 | 1 | 1 | DUF2431 | 10 | 177 | 2.3e-37 | 128.5 | 9.60002e-41 | 2.9e-37 | 128.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11829.1_03134.t1 | gi|47227136|emb|CAG00498.1| | unnamed protein product [Tetraodon nigroviridis] | 1.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11829.1_03134.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11829.1_03134.t1 atggagagaccattagatgggagtttactacttgtaggagaaggagacttttcgctgtctgttgccttggtatgtcacct gactgagaatgaccaatcactcaatatccctgtgattgcttcgagcatcgagtcagaagagactattcttaaacacaaga atgctcaggagaatatagcatggcttcaagaaaaaggggtcataattcatttgaacacagatgctactgttttgcaccag aatgctctacttaaagatgtcagattcaggcgaattgttttcaactttccccatgccggtggcaagtccaatcataagaa gaatcgcaaacttctgaacgacttcttttcaagtgcatcaaaagtccttgacaaggaaggtcaaatcatggtgaccttgt gtaaaggtcaaggtggcacacctgcagataaaccaatgagaaaatggcatgacagctggcaggtggtttccatggcagcc aatgcaggcctgaaacttacagaagtcttaaactttgatgctcataagttttttacaatacaaatccacaggcttcagaa gtcaagacaaagggtttcatacagaaggggcaataactcatgtatttga |
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Protein
| Protein ID | pfu_aug1.0_11829.1_03134.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11829.1_03134.t1 MERPLDGSLLLVGEGDFSLSVALVCHLTENDQSLNIPVIASSIESEETILKHKNAQENIAWLQEKGVIIHLNTDATVLHQ NALLKDVRFRRIVFNFPHAGGKSNHKKNRKLLNDFFSSASKVLDKEGQIMVTLCKGQGGTPADKPMRKWHDSWQVVSMAA NAGLKLTEVLNFDAHKFFTIQIHRLQKSRQRVSYRRGNNSCI |
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