Gene
| Gene Model ID | pfu_aug1.0_11839.1_68415 |
|---|---|
| Locus | scaffold11839.1 : 2363 ... 15329 : - |
| To GenomeBrowser | scaffold11839.1:2363..15329 |
| Genes list of scaffold | scaffold11839.1 |
| Synonym | pfu_aug2.0_1478.1_28307 |
Manual annotation
| Study field | Transcription Factors |
|---|---|
| Gene name | Pfu-MITF-related2 |
| Description | Best hit to CAI22453 transcription factor EB [Homo sapiens] by a BLASTP search against NCBI Homo sapiens nr database. We could not retrieve a bHLH domain, and therefore this gene is not included in the bHLH annotation paper. |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11839.1_68415.t1 | gi|241715136|ref|XP_002412122.1| | helix-loop-helix transcription factor, putative [Ixodes scapularis] | 6.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_11839.1_68415.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11839.1_68415.t1 tccaaaagtagaaatcaagaatgccagttttccattacggacgacgttgcggcagcagctcatgcgacagcagatgcagg atgaagataagaagaaggtcatcacacgacagcagctctcccttcctcagaccatcaacacacctatgtcacagtcgtat acaccggacgtacccacaaaaatcctcaaggtgaaaacaagattagagaatcctacacagttccatgtccaggaaaatca gaagcgtcagatttctcagttctttacgactgataccaaggtgctgcccagctcccttcccgtcattacccagacctctg tggccaacgtggcaccattaagcgggagtgcacctgttgaccctgacagtccgctatctgcaggattcagcagtgctgca acaagtgtctctgatatgaatgagtcgaaaggaggagaagattcaatataa |
|
Protein
| Protein ID | pfu_aug1.0_11839.1_68415.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11839.1_68415.t1 PKVEIKNASFPLRTTLRQQLMRQQMQDEDKKKVITRQQLSLPQTINTPMSQSYTPDVPTKILKVKTRLENPTQFHVQENQ KRQISQFFTTDTKVLPSSLPVITQTSVANVAPLSGSAPVDPDSPLSAGFSSAATSVSDMNESKGGEDSI |
|