Gene
| Gene Model ID | pfu_aug1.0_11841.1_60949 |
|---|---|
| Locus | scaffold11841.1 : 1 ... 14649 : + |
| To GenomeBrowser | scaffold11841.1:1..14649 |
| Genes list of scaffold | scaffold11841.1 |
| Synonym | pfu_aug2.0_870.1_01206 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11841.1_60949.t1 | 1 | 1 | AAA_16 | 17 | 99 | 1.1e-11 | 45.0 | 2.2e-14 | 1.2e-11 | 44.9 |
| pfu_aug1.0_11841.1_60949.t1 | 1 | 1 | AAA_22 | 39 | 115 | 3.6e-06 | 27.1 | 8.5e-09 | 4.9e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11841.1_60949.t1 | gi|148226206|ref|NP_001081844.1| | Cdc6-related protein [Xenopus laevis] | 3.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11841.1_60949.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11841.1_60949.t1 gacaagcttaccataaagccaagcagtcgttccacacagccaagcctgaacgtctggtgggccgagaaaaagaaacggag gaaatcaacaagtttgtgcgcggccatgtgtcggccaagacggcagggagtttatacgtatctggggccccagggacggg aaaaacggccactttgtcacatataatagatgatgtcaaggctagccacagttgtaaatgcttatacctgaactgtatga ccctgaaggactctgccaccgtctacggaaaactatacacggatctcaccggcaaatctccaccatcggcaaaagatagg caacgtgccttagaaaaagtcctaacggcaaatgggccaagcatgttgtacaagtccctccaaatcatcacccgtcccca agaaaataggcgtaatacaaatatccaaggtgttgtctga |
|
Protein
| Protein ID | pfu_aug1.0_11841.1_60949.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11841.1_60949.t1 QAYHKAKQSFHTAKPERLVGREKETEEINKFVRGHVSAKTAGSLYVSGAPGTGKTATLSHIIDDVKASHSCKCLYLNCMT LKDSATVYGKLYTDLTGKSPPSAKDRQRALEKVLTANGPSMLYKSLQIITRPQENRRNTNIQGVV |
|