Gene
| Gene Model ID | pfu_aug1.0_1185.1_07825 |
|---|---|
| Locus | scaffold1185.1 : 1 ... 17689 : + |
| To GenomeBrowser | scaffold1185.1:1..17689 |
| Genes list of scaffold | scaffold1185.1 |
| Synonym | pfu_aug2.0_58.1_26754 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1185.1_07825.t1 | 2 | 1 | Nop53 | 1 | 90 | 0.0 | 209.9 | 3.0e-10 | 4.5e-06 | 25.9 |
| pfu_aug1.0_1185.1_07825.t1 | 2 | 2 | Nop53 | 104 | 326 | 0.0 | 209.9 | 0.0 | 0.0 | 185.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1185.1_07825.t1 | gi|241653566|ref|XP_002411312.1| | cellular protein, putative [Ixodes scapularis] | 2.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1185.1_07825.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1185.1_07825.t1 aggacttgtagcagatcgaccagatgaacaattatttgttgttgataaatcatgccttgatgtccaggaagaaccagaac caaagaaaaggaaaagagaacctaaacctttaagatgtcattcaaatttggtgcttgatactagaataaaagctgcaaga atcccccacaacataagaaatgaaactttaaacaaaagacacaaaaatgtgatagagaagataaaaagtggagtgaaatc aaagacacagatagaggcagagaaacaaagagagggagccacgtcaacacgtaaacagaggatcgctgccatacgctcca tgcctaaagctactctaagtaaaaagccgtacgacatagcagctgtagaagtcccccacccaggggcctcatataaccct acctatgaggattatatgaatttattagcaaaggctcatcatgtggaagtaggaaaggtcagagaggagagaaagttaca caatgcattagagtccaagtttccgaaaatgtcaagatcagcattagaggaaaactggctagaagagatgtctgcagggc ttaaaaacgacaacgagccagatataaaaatagagccagacttactggataaactatctgtgaatcctccagtacggaga gaagacaagaaaacaaagactcagcgaaataaggaaaaactccaaaagaaaaaagacaaattaaaagagctccaaaaagc tgacaagacaaacaagagtgaaatattcagattaaagaaaatcaaagctgatataaaagccagggaagaatcactagata agagggctgcccttagacatgagcagcatctgaagaagtcatcacaaacacggaagctgggtagaacgaaatatgaggaa ccagaaattgaagtcaaattgagtgatgagctacagggatctcttagaaaacttaagccagaggggaaccttttagagga cagatacaagagtctgcaaaaacgcaatgtgatagaaccaaggcaacaagctaaaactcacagtttgcgtcagattaatc agatgggaacgctggtgacgggatcgagggcaggggcagaaatactacgcacgcgatcctaa |
|
Protein
| Protein ID | pfu_aug1.0_1185.1_07825.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1185.1_07825.t1 GLVADRPDEQLFVVDKSCLDVQEEPEPKKRKREPKPLRCHSNLVLDTRIKAARIPHNIRNETLNKRHKNVIEKIKSGVKS KTQIEAEKQREGATSTRKQRIAAIRSMPKATLSKKPYDIAAVEVPHPGASYNPTYEDYMNLLAKAHHVEVGKVREERKLH NALESKFPKMSRSALEENWLEEMSAGLKNDNEPDIKIEPDLLDKLSVNPPVRREDKKTKTQRNKEKLQKKKDKLKELQKA DKTNKSEIFRLKKIKADIKAREESLDKRAALRHEQHLKKSSQTRKLGRTKYEEPEIEVKLSDELQGSLRKLKPEGNLLED RYKSLQKRNVIEPRQQAKTHSLRQINQMGTLVTGSRAGAEILRTRS |
|