Gene
| Gene Model ID | pfu_aug1.0_1185.1_07826 |
|---|---|
| Locus | scaffold1185.1 : 17866 ... 21767 : + |
| To GenomeBrowser | scaffold1185.1:17866..21767 |
| Genes list of scaffold | scaffold1185.1 |
| Synonym | pfu_aug2.0_58.1_26755 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1185.1_07826.t1 | 2 | 1 | Condensation | 31 | 291 | 4.0e-19 | 68.5 | 1.1e-22 | 4.0e-19 | 68.5 |
| pfu_aug1.0_1185.1_07826.t1 | 1 | 1 | AMP-binding | 461 | 862 | 0.0 | 191.9 | 0.0 | 0.0 | 191.4 |
| pfu_aug1.0_1185.1_07826.t1 | 1 | 1 | AMP-binding_C | 870 | 950 | 5.3e-06 | 27.3 | 4.2e-09 | 1.5e-05 | 25.8 |
| pfu_aug1.0_1185.1_07826.t1 | 2 | 2 | Condensation | 985 | 1037 | 4.0e-19 | 68.5 | 0.4 | 1500.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1185.1_07826.t1 | gi|154686279|ref|YP_001421440.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1185.1_07826.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1185.1_07826.t1 atgccattccatgcggagaagaccggtgcatataatttaagattttatattgaacacatggaaacttcaagagctgcatc attaacgatggagacatcctggccattgaccctctcgcagcagagaatactgtttcttcagaaattgtcaccaaagtcga atgcatacgtggataccatagttttgaggacagggaaagatgtgttaagtgacgaaaagatcagtcgtctgctaaatgct tatccgatattgtccacggttattttgagagacaaaagttctgaagaatatcgcctgcagtgtgctgatatagatgtagg aaagatccagaaagaacgagctcctacaggaatcttactgcaatcgtacatttcggaaacgatccctgtgtttgatgtaa cgaagtgttcactagcttcttttcgatggattgaggacgggaccgatcatataacatttatagcacatgttcaccaaata ttatcttgtgtcttcgctttggataaactgcacaccattctggagaagcgtttgctcgcaaacgatgaaatgaacttggt aagctctgtctccatgtctcagtacgtagcagaagagaaacagtatcttgaatcaactcagtatgaagttgataaagaat tttggatgaagacattcaaagatgcaccttccgatgcaacaatttcactgagtcctttaaatgagcaaaacgatttagac aaacacaacgttaagactcggacgaaagaatttaggaattctgaaataatttcctctccgcagtattttcacgttgataa tgttccctattttctatcctgcctgaccatggtactacagcgctatcttggtacggaagacgtcacgatcgcagtcagac atgcacaaacttacacgctcttcccatttcgagttgatgtccaacagagtttcaacgaacacgttgctactgtttccact tcatgggaggatatacaactacatgcagatttcccttttcttcatttagctgatatcttatggtcactacatgggaagtc tttagaatcgttttgtgtagtagagctcgattttcaagaagtgaagaaatcaaagcatacactggtatgtatgccaaacc acgccagggtaccattacgaattcaaatcaacacgaattcggtgacggatgaaacttcaatacaactacactgggcggac ggatatgttgatgatggcattgccgaacgcttctttgacagcttattaaacctatgcttcttgagacatgagaaaagaat aaaagacattgctttcttgtcagcaaaggaaaccaaactattgaatctatatggaaaactacaaggcgtaacaatagaag ataagcctatacactcatcgttcgaagactacgcatcaacaggtggagacaaagctgcaattattatcgatgacaaatgt catacatatgccgaaataaatgaaatttcgaatgatttggcagatgtgattacaagagagaacgatacttccacaattaa ggagaagcctgttgttttatttatggaaaaggaccaccttgctgtaagcgccatactagcagtatggaaaaccggtttat atttccttcctttatcgactactcacacaactacccttaaggaactggcagaaagtcagaccatttcgctgataatgcat aacatggacatttccgaagatcttagatatttgttcaacacaaagggtgtaaaagcaatagacgttcgaatgcctttcga tccgatggtcggggaacgtactcctcactcacagtttatggtttctgacatagcttatgctatcagaacatcaggctcta ctggacgtccaaaattatgcaagatatcacacaaaagtatcactatcatgtcgaaagcgtgggtaaatgcttgtagcctc tcagctggatcaaggattcttcaatgggcacctctaagcttcgatgtcttcattggtgatcttgtcagagcattgatatc aatacaagggacactagttatatgtccggatgacagaagacttgatataccatatatccatatattgattcacaagcatc aaataaccaatattgaattcactccacagtttgctttgaaagctgtggaatcggcgagttctgaaatacttgactccctt aaaagcttagtgattggatccgatgttactcaccggaatctattcttaaacataaagagtaaattgaagaatgatcaacg atttgtgcatggatatggaatgacagaagctacaatcgattctatctactttgaatccgaggtaatacccttaacaagaa gtgggacagttcctattggaaagccattacccggagtcggggcactcattcttgattcagcaacgggtcttcgctgtcca gttgggacgatcggcgagttgtatttatatggcgacaccattgcatcaggagatgtagtgtgcgatgaggtaaagattga tcatcaaacgacaataaaggcactgagaacaaaggaccagtgttgttggctgccttcaggagacatagaaatatacggtc gtttggacgatgttgtcaaaataagaggatttcgagtaagtcttacggagattgagaataagattctgagttgtgttcaa acagctaaggaggtttccgtcttggtcattaaagatcaaaccgtaaaccatggcaaggattttcttgtggcgtatgttgt tccagaatcaaaagatgctattgtcgacatgaatgcgatttgtaaagctcttgaaggagaacttccttactatatgattc ccgacgcagtctgcccaatgcacaccataccaatgacattgaatggaaaggttaacagaaagggtctcccttcgtttggg gaaattttacagaggtcaaaatgtgacagcgcttttgcaatggaagcagaaaaggacgataactgtccagtaatacagaa gctttttgcaaaggcattaggattgaccgatcacgagaaattaagccgtacagatacctttatgaatcaaggaggccact ccatgattttacttagctttcacggcttgattttacagaatacatcatacgaaatcaccgtaaaggacattttactacac cctactatcaatatgctagaaacgtacctacgaagcttataa |
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Protein
| Protein ID | pfu_aug1.0_1185.1_07826.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1185.1_07826.t1 MPFHAEKTGAYNLRFYIEHMETSRAASLTMETSWPLTLSQQRILFLQKLSPKSNAYVDTIVLRTGKDVLSDEKISRLLNA YPILSTVILRDKSSEEYRLQCADIDVGKIQKERAPTGILLQSYISETIPVFDVTKCSLASFRWIEDGTDHITFIAHVHQI LSCVFALDKLHTILEKRLLANDEMNLVSSVSMSQYVAEEKQYLESTQYEVDKEFWMKTFKDAPSDATISLSPLNEQNDLD KHNVKTRTKEFRNSEIISSPQYFHVDNVPYFLSCLTMVLQRYLGTEDVTIAVRHAQTYTLFPFRVDVQQSFNEHVATVST SWEDIQLHADFPFLHLADILWSLHGKSLESFCVVELDFQEVKKSKHTLVCMPNHARVPLRIQINTNSVTDETSIQLHWAD GYVDDGIAERFFDSLLNLCFLRHEKRIKDIAFLSAKETKLLNLYGKLQGVTIEDKPIHSSFEDYASTGGDKAAIIIDDKC HTYAEINEISNDLADVITRENDTSTIKEKPVVLFMEKDHLAVSAILAVWKTGLYFLPLSTTHTTTLKELAESQTISLIMH NMDISEDLRYLFNTKGVKAIDVRMPFDPMVGERTPHSQFMVSDIAYAIRTSGSTGRPKLCKISHKSITIMSKAWVNACSL SAGSRILQWAPLSFDVFIGDLVRALISIQGTLVICPDDRRLDIPYIHILIHKHQITNIEFTPQFALKAVESASSEILDSL KSLVIGSDVTHRNLFLNIKSKLKNDQRFVHGYGMTEATIDSIYFESEVIPLTRSGTVPIGKPLPGVGALILDSATGLRCP VGTIGELYLYGDTIASGDVVCDEVKIDHQTTIKALRTKDQCCWLPSGDIEIYGRLDDVVKIRGFRVSLTEIENKILSCVQ TAKEVSVLVIKDQTVNHGKDFLVAYVVPESKDAIVDMNAICKALEGELPYYMIPDAVCPMHTIPMTLNGKVNRKGLPSFG EILQRSKCDSAFAMEAEKDDNCPVIQKLFAKALGLTDHEKLSRTDTFMNQGGHSMILLSFHGLILQNTSYEITVKDILLH PTINMLETYLRSL |
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