Gene
| Gene Model ID | pfu_aug1.0_1185.1_07828 |
|---|---|
| Locus | scaffold1185.1 : 29415 ... 34005 : - |
| To GenomeBrowser | scaffold1185.1:29415..34005 |
| Genes list of scaffold | scaffold1185.1 |
| Synonym | pfu_aug2.0_58.1_26756 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1185.1_07828.t1 | 1 | 1 | Condensation | 4 | 243 | 3.6e-09 | 35.8 | 2.1e-12 | 6.1e-09 | 35.1 |
| pfu_aug1.0_1185.1_07828.t1 | 2 | 1 | AMP-binding | 203 | 226 | 0.0 | 179.1 | 0.29 | 870.0 | -2.0 |
| pfu_aug1.0_1185.1_07828.t1 | 2 | 2 | AMP-binding | 380 | 779 | 0.0 | 179.1 | 0.0 | 0.0 | 177.7 |
| pfu_aug1.0_1185.1_07828.t1 | 2 | 1 | AMP-binding_C | 681 | 692 | 2.2e-06 | 28.5 | 0.88 | 2600.0 | -0.6 |
| pfu_aug1.0_1185.1_07828.t1 | 2 | 2 | AMP-binding_C | 787 | 867 | 2.2e-06 | 28.5 | 6.1e-09 | 1.8e-05 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1185.1_07828.t1 | gi|339008839|ref|ZP_08641412.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1185.1_07828.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1185.1_07828.t1 atgtcaagtgcctatgtagatacaatagcattcaagacaaaaaaggacatatcaagtgaagacatagtcaattgtctgct gacgactcatccgatattatcgacgaaaatttggaaagacgaacattctagcgaataccgtcaacgatgtgttaggtatc gagtagaaaggaaaatacccagagaacaagttcctgtctcgattccattacaatcttatatttcggaaacgattccagtt ttcaatttaaccaacagctcgctagcttctttcagggttattgagtgcaagaatgatgttgtatttgttgctcacgttca ccaaattcttatctgtcttctcaaagtggatgaattgcaagcagcactggagaacattctatatggtcaattaccctact cggtaagcaatgttacttacgctcagcatgtttcgcaagaccaactgtaccttgaatctgctcagtatgatgtcgacaaa gaattctggatgaaaacttacagagctgcaccatccgatgcattgatttctctttctccatgtcatgttgaacaaaactt ttccgacatacacaatgctaaaattctgctaaagcaatttcaaacttcgaagatagcttccttttcgaattatttccatg aatttggcgtgagtaatcttcactttttcctgtcttgcctgaccattgttctacagagataccttggtacagaggacgtt acgatcgcagtaagacgtgaagaaacttacacgctcttcccatttcgagtcgatgtacaacagaatttcaacgatcacgt cgctgctgtttctaagtcttggaaagagatacagctacactcaaactttccttttcttcacctagcggacctattatgga cactttacgggaagtctatagaatcattttgtgtattagagctcgattttaaggaggaaatgtcaaatcatgcactggtt tgtatgccgaaacatgcaagagttcctttgcgattgcagatcaacgcgaatctggtaactgatgaaacttctatacagct agaatgggcagacgaatatgtcgatgatggcattgctgaacgcttcttcgacagcttccagagtgtggcaatagaagaga aacccatacactcaactttcgaggaatatgctacaaaagaaggcaataaagtagctgtcgtcgcccgggaaaagttcctc acctataaagaaatcaatgaaatatctaacgacgttgctggtatgatcatagcagataccgaccttagcagaatcaggga aaggactgttctcttatttatggaaaaagaccaacacgcagctgtttggaaagttggtggatattttttgccactttcta ccacacatgaaaccacgctaaaggaacttctacggagtcatccgatttcgctgatgatacataatgtggacatttctgag gatattgtcgacctgctttgtacaacagatataaaggcaatagacatgcgaaaacctttctcccataggaacgggagatg caagattcgacgggcgctgagcgatcctatcttctctgatgtagcttatgctataagaacatccgggtctacaggacgtc caaaactatgcaagattacacacataggtctgaatgttctgtcaaaagcatgggtaaatgcttgtaatctttgtcatgga gctagaattctgcaatgggcacctctaagcttcgatgtctctatcggcgatctggttagagcactagtatcagtacaagg tacgctggttatatgcccggatgatcggaagctggatatcccatatatccattcaatgattcgcagacacgaaataacga acgtcgaattcactccacacttcgctctgagggtagtcgaaaatgacaattcaaaaatgttggactccctaaagtgttta gtcgttggttcagatattgcgcatcaaaatctgtttcaaaacataaaaagtaaactgagacatgatcaaatacttgcaaa cagctatggaatgacagaagctacaattgattccacatactttgaatccaaggaaattccaaggacgagaagtggaaccg ttccaatcggaaaacctttacccggagtcggggcactcattctcgattcagtaacgggtcttcgctgtccagttgggacg atcggtgagttgtatttatatggtgacaccattgcatcaggcgatgtagtatgcgatgaggtaaagattgatgatcaaat gacaataaaggcactgagaacaaaggaccagtcatgttggctgccttcaggtgacatcgaattttacggtcgtctggacg acgttgtcaaaataagaggatttcgagtaagtcttacagagattgagaataagattctgagttgtgttcaaacagcaaag gaggtttccgtcttggtcattaaagatcacacggtaaaccatggcaaggatttccttgtggcatatgttgtcccagaacc atataatgctgttgtagacagaggaataatctgtaaagctcttgaaggggatcttccatattatatgatcccagacttgg tttgccagattgaaagcattcctatgacattaaacgggaaagtaaacaagaaaggacttccctcactgaaagaagtttta cagaggacaaaatgtaactctgcgagaacatcagaaaaggatgataaatgtacacaaatacagaagcttttcgcaaaggc attgggattggaccattacacgaacattagtcgtacagacaccttcatgaatcaaggaggccattctttggttttacttt gctttcatggattgattgtacagaatacaccatacaagataaccataaaagacattttacatcaccctaccatcgatacg ctggaagattacctacaaaggatgacatag |
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Protein
| Protein ID | pfu_aug1.0_1185.1_07828.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1185.1_07828.t1 MSSAYVDTIAFKTKKDISSEDIVNCLLTTHPILSTKIWKDEHSSEYRQRCVRYRVERKIPREQVPVSIPLQSYISETIPV FNLTNSSLASFRVIECKNDVVFVAHVHQILICLLKVDELQAALENILYGQLPYSVSNVTYAQHVSQDQLYLESAQYDVDK EFWMKTYRAAPSDALISLSPCHVEQNFSDIHNAKILLKQFQTSKIASFSNYFHEFGVSNLHFFLSCLTIVLQRYLGTEDV TIAVRREETYTLFPFRVDVQQNFNDHVAAVSKSWKEIQLHSNFPFLHLADLLWTLYGKSIESFCVLELDFKEEMSNHALV CMPKHARVPLRLQINANLVTDETSIQLEWADEYVDDGIAERFFDSFQSVAIEEKPIHSTFEEYATKEGNKVAVVAREKFL TYKEINEISNDVAGMIIADTDLSRIRERTVLLFMEKDQHAAVWKVGGYFLPLSTTHETTLKELLRSHPISLMIHNVDISE DIVDLLCTTDIKAIDMRKPFSHRNGRCKIRRALSDPIFSDVAYAIRTSGSTGRPKLCKITHIGLNVLSKAWVNACNLCHG ARILQWAPLSFDVSIGDLVRALVSVQGTLVICPDDRKLDIPYIHSMIRRHEITNVEFTPHFALRVVENDNSKMLDSLKCL VVGSDIAHQNLFQNIKSKLRHDQILANSYGMTEATIDSTYFESKEIPRTRSGTVPIGKPLPGVGALILDSVTGLRCPVGT IGELYLYGDTIASGDVVCDEVKIDDQMTIKALRTKDQSCWLPSGDIEFYGRLDDVVKIRGFRVSLTEIENKILSCVQTAK EVSVLVIKDHTVNHGKDFLVAYVVPEPYNAVVDRGIICKALEGDLPYYMIPDLVCQIESIPMTLNGKVNKKGLPSLKEVL QRTKCNSARTSEKDDKCTQIQKLFAKALGLDHYTNISRTDTFMNQGGHSLVLLCFHGLIVQNTPYKITIKDILHHPTIDT LEDYLQRMT |
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