Gene
| Gene Model ID | pfu_aug1.0_11850.1_68418 |
|---|---|
| Locus | scaffold11850.1 : 2806 ... 15784 : + |
| To GenomeBrowser | scaffold11850.1:2806..15784 |
| Genes list of scaffold | scaffold11850.1 |
| Synonym | pfu_aug2.0_386.1_20704 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11850.1_68418.t1 | 1 | 1 | Ribosomal_L13 | 59 | 123 | 9.4e-15 | 54.8 | 8.7e-19 | 1.3e-14 | 54.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11850.1_68418.t1 | gi|318086988|gb|ADV40086.1| | putative ribosomal protein L13 [Latrodectus hesperus] | 6.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11850.1_68418.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11850.1_68418.t1 atgtatgttatcgcccgaggagtccgactgacattcagagagaagctgccttctctaaataggtttggacaggacccgtc atggagtcccggcgtcacagtcagtcagcgtgcaagttttaagaatgcgctggtactagactgtagattgcaatgggcga ccatgagtcgtacttggtggatgtatgatgccaaatatcagtgtccgttccgctctgctgacctccttgtcaaatatcta caaggcaaacacaaaccagtatatcatagatattctgatgtaggtgatcatgtagtagtgattaacacaggacagattgc catgagagaggattactggagaacgttctcatacagccatcacacaaggttatatttaagaaattaa |
|
Protein
| Protein ID | pfu_aug1.0_11850.1_68418.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11850.1_68418.t1 MYVIARGVRLTFREKLPSLNRFGQDPSWSPGVTVSQRASFKNALVLDCRLQWATMSRTWWMYDAKYQCPFRSADLLVKYL QGKHKPVYHRYSDVGDHVVVINTGQIAMREDYWRTFSYSHHTRLYLRN |
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