Gene
| Gene Model ID | pfu_aug1.0_11853.1_10384 |
|---|---|
| Locus | scaffold11853.1 : 49074 ... 64635 : - |
| To GenomeBrowser | scaffold11853.1:49074..64635 |
| Genes list of scaffold | scaffold11853.1 |
| Synonym | pfu_aug2.0_154.1_13685 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11853.1_10384.t1 | 1 | 1 | DEAD_2 | 153 | 338 | 0.0 | 168.7 | 0.0 | 0.0 | 168.7 |
| pfu_aug1.0_11853.1_10384.t1 | 1 | 1 | Helicase_C_2 | 625 | 811 | 0.0 | 191.5 | 0.0 | 0.0 | 189.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11853.1_10384.t1 | gi|115770446|ref|XP_792082.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11853.1_10384.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11853.1_10384.t1 atgcagcgtaactacttgtacagtatatctaaaggtcaatctgcaaataaaggacgtataggcaagaacaccacatctga accagactggattttagagtacgctcagaagaaagaaaaagaagaccaactgcagaaagtgaagcaagaacaggagcaaa ttataaagaaagaacaaaaattaattgaaatgaggaagagagccaacaggtatggaaaacggaaaagatctaaactcgat gaggaatttgacgacctgatgaaaggtgcgtcaatagatattcaacaagcgttaaaagatgagttgaagaaattggatga cgatgagtcaaagaattctgaaaatgacgatgatttggtgttagaggaatataatagtgataacgaaaaaccaagaggag ataactctgatagcgaaaatgaagacgagactgaggagcatattacaaaaatctattattgtagtagaactcactctcaa ctctcacagtttgtcagagagattatgaaaagtccgtatggtgaagaaactagggttgtctcccttggatcaagaataaa tttatgcgtaaacgaagcggtacgaaaactaagatctatcacattgatgaatgatgcctgtctggacatgcagaaaaaga agaataagaaggttgaacggaacaacgagggggagagtgtaaagaaacgacaaaacaaagcgggaccgggttgtccgttc tataagcaggaccctatacaggattttagtgatagaatgttggcagaagtcatggacatggaggaaatagtcaagacagg taagcagatgaaggcgtgtccttactatgccagccgctatgccatccctgtggccgaggttgtggtgctaccttataaca cattgctacacaagtcgacaagagaggcctgtggtatcaaactggaaggtaacatcgtggtgatcgacgaggcccacaat ctgctagagacgataaacgcggtacacagcatggaggtcacagggtcccagttattacgtgcacacagtcagctgaccca gtatgaacaaaggtacagatcgagactgaaagccaaaaacctgatgtacatcaagcagattctcttcatcttaactcaaa ttctcaagtttctcggagggaaacctggaatacatggggataagcagtttgtcggaaagccagaaacaaaactgtctaca atcaataattttttgttccgatcacagctcgaaaatttaaacttatttaaagtggtccagtactgcagaaaaagtcagat ttccaagaaactgcaaggatttgcagagaaatatccagacgaaggtgtggacataaaggagaagaaagaacatgaatcgg caaagtcgggtgtgagcaactttctaagggagattactcaaggaaacattttgaacgatcccagtttggagatgaatggt caatccgtcaaagaacaagacgggattgttgttatgagatcacctatgatgttgatagagggatttttaagtgctcttac aaatgcagataaagacggtcgaattgtctttaacaaacagagccttctcagccaatgcagcctgaagtttttgcttctta atccagcagttcatttcagaagtgttatacaagagtcacgtgcagttatagtagcgggtggtacaatgcagccaatcagt gaattcaaagatcaactattccattcagctggggtggagcctgaaaggataatggaatattcctgtggtcatgtgatccc tacagatcatctattggctgtttccatggcgacaggcccaactggccttgacctagatttcacttaccaatctagagaca atcccaaacttctaaatgaacttggtgtacttataagtaacgtgtgtaatttagtgcctggtggtgttgtctgcttcttc ccatcttatgaataccaaagatccgttcaaactgtctgggaaaaaagtgggattttgatgaaattaggcaggaaaaagcg agtttttcaggagccaaagagggccaatcaagtcgaccaagttctggaggcatattcagagtgtatagagaaatcaaaat ctactactgggcttacaggtgccattttgttttgtgtggtaggagggaagatgagcgaaggaatcaacttctcagacgac ctgggcagatgtgttataatgattggtatgccgtatccaaatatcaagtcaccagaactccaggagaagatggagtatct caacaccaacttcaagccggattccgagggacgtagagcaggccaagtacactatgagaatctatgcatgaaagctgtca accaatcaataggtcgcgctattcgtcaccgtggtgattacgccacaattttgttgcttgacaagcggtacggtagaccg agtgtcgtatccaaattgccgaactggatcgtcaaaagtttgatcaagactgagaagtatggagttgcgatatcaaatgt ctctaaatttttcagtaacaagaagtga |
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Protein
| Protein ID | pfu_aug1.0_11853.1_10384.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11853.1_10384.t1 MQRNYLYSISKGQSANKGRIGKNTTSEPDWILEYAQKKEKEDQLQKVKQEQEQIIKKEQKLIEMRKRANRYGKRKRSKLD EEFDDLMKGASIDIQQALKDELKKLDDDESKNSENDDDLVLEEYNSDNEKPRGDNSDSENEDETEEHITKIYYCSRTHSQ LSQFVREIMKSPYGEETRVVSLGSRINLCVNEAVRKLRSITLMNDACLDMQKKKNKKVERNNEGESVKKRQNKAGPGCPF YKQDPIQDFSDRMLAEVMDMEEIVKTGKQMKACPYYASRYAIPVAEVVVLPYNTLLHKSTREACGIKLEGNIVVIDEAHN LLETINAVHSMEVTGSQLLRAHSQLTQYEQRYRSRLKAKNLMYIKQILFILTQILKFLGGKPGIHGDKQFVGKPETKLST INNFLFRSQLENLNLFKVVQYCRKSQISKKLQGFAEKYPDEGVDIKEKKEHESAKSGVSNFLREITQGNILNDPSLEMNG QSVKEQDGIVVMRSPMMLIEGFLSALTNADKDGRIVFNKQSLLSQCSLKFLLLNPAVHFRSVIQESRAVIVAGGTMQPIS EFKDQLFHSAGVEPERIMEYSCGHVIPTDHLLAVSMATGPTGLDLDFTYQSRDNPKLLNELGVLISNVCNLVPGGVVCFF PSYEYQRSVQTVWEKSGILMKLGRKKRVFQEPKRANQVDQVLEAYSECIEKSKSTTGLTGAILFCVVGGKMSEGINFSDD LGRCVIMIGMPYPNIKSPELQEKMEYLNTNFKPDSEGRRAGQVHYENLCMKAVNQSIGRAIRHRGDYATILLLDKRYGRP SVVSKLPNWIVKSLIKTEKYGVAISNVSKFFSNKK |
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