Gene
| Gene Model ID | pfu_aug1.0_11868.1_17792 |
|---|---|
| Locus | scaffold11868.1 : 1 ... 24988 : + |
| To GenomeBrowser | scaffold11868.1:1..24988 |
| Genes list of scaffold | scaffold11868.1 |
| Synonym | pfu_aug2.0_1629.1_31806 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11868.1_17792.t1 | 3 | 1 | Kinesin | 27 | 197 | 0.0 | 264.4 | 1.4013e-45 | 2.40042e-42 | 144.8 |
| pfu_aug1.0_11868.1_17792.t1 | 3 | 2 | Kinesin | 201 | 252 | 0.0 | 264.4 | 9.7e-19 | 1.6e-15 | 56.6 |
| pfu_aug1.0_11868.1_17792.t1 | 3 | 3 | Kinesin | 405 | 459 | 0.0 | 264.4 | 3.3e-19 | 5.5e-16 | 58.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11868.1_17792.t1 | gi|291237967|ref|XP_002738904.1| | PREDICTED: kinesin-like protein KIF23-like, partial [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11868.1_17792.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11868.1_17792.t1 gtttactgtagaattcgtcccctggacaatccagatgatcctatttgtattaaagccgtcagctccacagtggtgcagct tactccttctgagtaccagtttacgtttcaatacgtgtttgatgagtatacttcacagaagtccatatatgattatgttg ccttacccctagtagaagatctgatcaaaggaaagaatggcctcctgttcacatacggcattacttcctctgggaagact tacacaatgacaggagtaccaaaggaccagggtatattaccaaggtgtttagatgtcctgttcaacagcatcagtggact tcaagccaagaaatattatgacaagtcttattccttgtattactacagaccaccacagtccaagattttaaggacggatt ccaatgacaacatgtacgtcatgaactgtgtggaagtggagataaagagccctgaggaagcattcgacattctctataaa ggtcagaagagaaggaaagtggctcatacagctctcaatgccgagtccagcagaagtcatagtatctttaatatccgtct ggtacaggccccattagatcccagaggagaggaagttctcacaatggtgccgtatagagattcaaagctgactcacttgt ttaagaactactttgacgacaatggcaaagtccgaatggttgtttgtgtcaacccaagagctgatgaatttgatgaaaca attcatgtcatgaaatttgcggagctgtcacaagaagtcctggtttcaagatcacaacaagttcgttttgatatcggttt gactccaggcagacgaaagatgaaccaacaatacaaagaaaatatagtagaggaagcccctcccttaccagagatgttgt acagtttaggtggaggattcccatctttagagctactccatgcccaagatgattgtactctcaaacaactggaggagttc ttactgcagcagagtgcccagagggaaatgctgatattagactttgtcaacagacaggatcagtttagaagtcggcttgt ggaatttgagaaggaatatgatagtattaagtataaatatgaggaccagaaggctcgctgtgataaaaaagacagttata ttcagaaattagaggctcgagtaagaaacctggaaaagaagaacgatgaactttcaaaacatcataaagatgctgatagg gagagaagggaactggaggccaggatggtgccgtatagagactcaaagctgactcacttgtttaagaactactttgacga caatggcaaagtccgaatggttgtttgtgtcaacccaagagctgatgaatttgatgaaacaattcatgtcatgaaatttg cggagctgtcacaagaagtcctggtatcaagatcacaacaagttcgttttgatatcggtttgactccaggcagacgaaag atgaaccaacaatacaaagaaaatatagtagaggaagcccctcccttaccagagatgttgtacagtttaggtggaggatt cccatccttagagctactccatgcccaagatgattgtactctcaaacagctagaggagttcttactgcagcagagtgccc agagggaaatgctgatattagactttgtcaacagacaggatcagtttagaagtcggcttgtggaatttgagaaggaatat gatagtattaagtataaatatgaggaccagaaggcacgctgtgataaaaaagacagttatattcagaaattagaggctcg agtaagaaacctggaaaagaagaacgatgaactttccaaacatcataaagatgctgatagggagagacgggaactggagg ccaggttgcagcatcaacagcaacctcccaaaacacccactgtaaaacacaaantgaagaacgacttcagaaccaggcta gaaatgaacaatcagcactgggaaaaaaatctgatcaaggaaaggcagaaaatagagctagaatttggtggacaaatctg ggaaaaggaacagaaactgaacatgttgaaggacattgtaaatgaaggaaatgaagcattcactcccacagtccctccta aaccttcaaatttccgaacgccagcagctcgatcaaaaacatacacaacgccagggaatatcaagtcagcacgttcagaa acagacatgagtaaagttggtttgagtacaccgagaaccagaacagctaccactggcacggtggcatcaaccagggcaat gtatgaaaggggcagagtgccatcatcacaaaaacctcctgttactcctagacaaacacccacttacaatcctcgacata ggcgatctaagtcatcatcaaacgctgaaacatggttagatcacagaccgacaggcaatgtagagttagacacagttctc caaccaaaactgaggaaaaagaagtctgtatcaaagctagaggtcaaggacacaaaggaagcatccaaatatatgttaac tcangagactgtatgccgacagcaggaggaggtacagctgtag |
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Protein
| Protein ID | pfu_aug1.0_11868.1_17792.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11868.1_17792.t1 VYCRIRPLDNPDDPICIKAVSSTVVQLTPSEYQFTFQYVFDEYTSQKSIYDYVALPLVEDLIKGKNGLLFTYGITSSGKT YTMTGVPKDQGILPRCLDVLFNSISGLQAKKYYDKSYSLYYYRPPQSKILRTDSNDNMYVMNCVEVEIKSPEEAFDILYK GQKRRKVAHTALNAESSRSHSIFNIRLVQAPLDPRGEEVLTMVPYRDSKLTHLFKNYFDDNGKVRMVVCVNPRADEFDET IHVMKFAELSQEVLVSRSQQVRFDIGLTPGRRKMNQQYKENIVEEAPPLPEMLYSLGGGFPSLELLHAQDDCTLKQLEEF LLQQSAQREMLILDFVNRQDQFRSRLVEFEKEYDSIKYKYEDQKARCDKKDSYIQKLEARVRNLEKKNDELSKHHKDADR ERRELEARMVPYRDSKLTHLFKNYFDDNGKVRMVVCVNPRADEFDETIHVMKFAELSQEVLVSRSQQVRFDIGLTPGRRK MNQQYKENIVEEAPPLPEMLYSLGGGFPSLELLHAQDDCTLKQLEEFLLQQSAQREMLILDFVNRQDQFRSRLVEFEKEY DSIKYKYEDQKARCDKKDSYIQKLEARVRNLEKKNDELSKHHKDADRERRELEARLQHQQQPPKTPTVKHKXKNDFRTRL EMNNQHWEKNLIKERQKIELEFGGQIWEKEQKLNMLKDIVNEGNEAFTPTVPPKPSNFRTPAARSKTYTTPGNIKSARSE TDMSKVGLSTPRTRTATTGTVASTRAMYERGRVPSSQKPPVTPRQTPTYNPRHRRSKSSSNAETWLDHRPTGNVELDTVL QPKLRKKKSVSKLEVKDTKEASKYMLTXETVCRQQEEVQL |
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