Gene
| Gene Model ID | pfu_aug1.0_1189.1_51222 |
|---|---|
| Locus | scaffold1189.1 : 2646 ... 21295 : + |
| To GenomeBrowser | scaffold1189.1:2646..21295 |
| Genes list of scaffold | scaffold1189.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1189.1_51222.t1 | 2 | 1 | PHD | 8 | 56 | 2.3e-07 | 30.3 | 4.7e-11 | 2.3e-07 | 30.3 |
| pfu_aug1.0_1189.1_51222.t1 | 2 | 1 | PHD_2 | 20 | 55 | 2.6e-13 | 49.0 | 5.3e-17 | 2.6e-13 | 49.0 |
| pfu_aug1.0_1189.1_51222.t1 | 2 | 2 | PHD_2 | 62 | 68 | 2.6e-13 | 49.0 | 0.28 | 1400.0 | -1.3 |
| pfu_aug1.0_1189.1_51222.t1 | 2 | 2 | PHD | 63 | 70 | 2.3e-07 | 30.3 | 0.46 | 2300.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1189.1_51222.t1 | gi|326921658|ref|XP_003207073.1| | 8.00141e-43 |
Transcript
| Transcript ID | pfu_aug1.0_1189.1_51222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1189.1_51222.t1 atgaaggagatggtcggcggatgctgcgtttgctccgacgaacaagggtggactgaaaaccccctggtatattgcgatgg acaaggttgcaatgtagctgtgcatcaagcttgctatggcatagttcatgttcccactgggccgtggttttgtcgaaaat gcgaatcacaagagagagcggcacgagtgaaatgtgagttgtgccctcagaaagatggagctctgaagaggacagacaca ggagtgcccagggccagggtttgttgtgtgaggagaagggtaactatggcgacaacgttaaatattgtgggtactgcact taccactacaagaaattgatctcaagagaaaggagaaaagaagaccaaacgttcaaaaccttctttactggcagtaaatc ggagacttagtcgaaatctgtccatagacggagaagacgctgtgcatcctgttgctaggaaacaaaagaagaagggggag ttaactctgaacacaaacagcattggaagtgttacaggcaatggtttaggtgagtttcccacaaccctggagcagctatt agagagacagtgggaacaaggatcacagttcctgatgaaacaaggggaacattttgacattgcatcattacttcattgcc tacatcatctaaagtcagaaaacaaacagctggaggaccatgtcaaatcattgtcagctagaaaggatcatttactagca gttaacgctcgactttccattcctctcgactcgggtatcaatcaccttagctccagtttctctccggaaaagtccaagga actctctgctgtcaatcttcagaacatctacgatgggaaactacttctcatagcgtag |
|
Protein
| Protein ID | pfu_aug1.0_1189.1_51222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1189.1_51222.t1 MKEMVGGCCVCSDEQGWTENPLVYCDGQGCNVAVHQACYGIVHVPTGPWFCRKCESQERAARVKCELCPQKDGALKRTDT GVPRARVCCVRRRVTMATTLNIVGTALTTTRNXSQEKGEKKTKRSKPSLLAVNRRLSRNLSIDGEDAVHPVARKQKKKGE LTLNTNSIGSVTGNGLGEFPTTLEQLLERQWEQGSQFLMKQGEHFDIASLLHCLHHLKSENKQLEDHVKSLSARKDHLLA VNARLSIPLDSGINHLSSSFSPEKSKELSAVNLQNIYDGKLLLIA |
|