Gene
Gene Model ID | pfu_aug1.0_11928.1_60961 |
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Locus | scaffold11928.1 : 11227 ... 39148 : - |
To GenomeBrowser | scaffold11928.1:11227..39148 |
Genes list of scaffold | scaffold11928.1 |
Synonym | pfu_aug2.0_277.1_23796 |
Manual annotation
Study field | signal molecules |
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Gene name | Wnt1 |
Description | Blast hits to various organisms Wnt1.Best hits to Haliotis asinina wingless gene, and Octopus, Planaria, Squid, Capitella Wnt1 genes. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_11928.1_60961.t1 | 1 | 1 | wnt | 26 | 81 | 8.4e-13 | 48.1 | 6.6e-17 | 9.7e-13 | 47.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_11928.1_60961.t1 | gi|83271048|gb|ABC00196.1| | wingless, partial [Haliotis asinina] | 5.0e-27 |
Transcript
Transcript ID | pfu_aug1.0_11928.1_60961.t1 |
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Definition | - |
>pfu_aug1.0_11928.1_60961.t1 gactcttgccaacattgggaagccttcaaacgatcttcactccaacactcagctttataatagtcccagtttactcccct tgactaaacgacaacgccgcttggtggccaaaaaccctgacgtcatattggcgctaatgggtggtgcgcgcatggcaatc gacgaatgtaaatttcagttcagacatagaagatggaactgtccgacaaaagatgtaggtcacggcggctcaatttttgg gaaaatcttagagcgtgttcacaacgatgatgtttcgtcaacgatgcgctttcttcgccaaatccttttgtaa |
Protein
Protein ID | pfu_aug1.0_11928.1_60961.t1 |
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Definition | - |
>pfu_aug1.0_11928.1_60961.t1 TLANIGKPSNDLHSNTQLYNSPSLLPLTKRQRRLVAKNPDVILALMGGARMAIDECKFQFRHRRWNCPTKDVGHGGSIFG KILERVHNDDVSSTMRFLRQILL |