Gene
| Gene Model ID | pfu_aug1.0_11928.1_60961 |
|---|---|
| Locus | scaffold11928.1 : 11227 ... 39148 : - |
| To GenomeBrowser | scaffold11928.1:11227..39148 |
| Genes list of scaffold | scaffold11928.1 |
| Synonym | pfu_aug2.0_277.1_23796 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | Wnt1 |
| Description | Blast hits to various organisms Wnt1.Best hits to Haliotis asinina wingless gene, and Octopus, Planaria, Squid, Capitella Wnt1 genes. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11928.1_60961.t1 | 1 | 1 | wnt | 26 | 81 | 8.4e-13 | 48.1 | 6.6e-17 | 9.7e-13 | 47.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11928.1_60961.t1 | gi|83271048|gb|ABC00196.1| | wingless, partial [Haliotis asinina] | 5.0e-27 |
Transcript
| Transcript ID | pfu_aug1.0_11928.1_60961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11928.1_60961.t1 gactcttgccaacattgggaagccttcaaacgatcttcactccaacactcagctttataatagtcccagtttactcccct tgactaaacgacaacgccgcttggtggccaaaaaccctgacgtcatattggcgctaatgggtggtgcgcgcatggcaatc gacgaatgtaaatttcagttcagacatagaagatggaactgtccgacaaaagatgtaggtcacggcggctcaatttttgg gaaaatcttagagcgtgttcacaacgatgatgtttcgtcaacgatgcgctttcttcgccaaatccttttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_11928.1_60961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11928.1_60961.t1 TLANIGKPSNDLHSNTQLYNSPSLLPLTKRQRRLVAKNPDVILALMGGARMAIDECKFQFRHRRWNCPTKDVGHGGSIFG KILERVHNDDVSSTMRFLRQILL |
|