Gene
| Gene Model ID | pfu_aug1.0_11933.1_53761 |
|---|---|
| Locus | scaffold11933.1 : 9201 ... 15126 : - |
| To GenomeBrowser | scaffold11933.1:9201..15126 |
| Genes list of scaffold | scaffold11933.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11933.1_53761.t1 | 2 | 1 | SRCR | 3 | 70 | 1.7e-16 | 60.3 | 5.4e-09 | 6.6e-06 | 26.3 |
| pfu_aug1.0_11933.1_53761.t1 | 2 | 2 | SRCR | 90 | 177 | 1.7e-16 | 60.3 | 3.0e-11 | 3.8e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11933.1_53761.t1 | gi|115685829|ref|XP_001184640.1| | 3.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11933.1_53761.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11933.1_53761.t1 atgtttaatgatactgaagcaagtgttgtgtgtcgataccttgggtacgccactggcaaaagtgtatgctgctcagcctt aggcgcgctaaccattgacaagcaaatagaaatatcaagactgagttgcacgggaacagagtctaatccacaattctgca gtaaggagactaatgcatgcagtagcagaaactacgcatccgtgtactgcatgacgtcggttaagactgacaatgccacg ctgacgtttcctgggaccgtgccatacggagctctgactgttaaccgccacggacttgagggtcatatttgcctcgatgg ttttgatgacaccgatgctacaatcgcatgtgaatcgcttaattatgggcatggccggaaaataaaagtgatgcagagaa gacgctacccaatcataatggggcaggtggtttgtccacaagctatctcggagttcaaattctgtcagtacaatacgttt ggtacagatccaatgtgtacatcgtctgacgatgtcgccggggctatatgttataataatgctacgcagagtataaccaa agtaacattagcccagacgtctagtgataacgtgacggttatagtcgccgttatcgtatcatgttgtgttttactgatcg ttgtcatcattgtggttgcagtgttcttgaaatgcaggaacagagagggaacgaaaggcgtctacaacgaggctgttcta caacgtaaagcagacggttcatttcatgcacaaaatcccttacatgacatcaatattgacaatgacggtgaagcacgtgt tcatatagacagacagggcagtgtcgttgaatattccccaacacctaaagtcgatgttccccaatcctactcaaactttt tatatgaatctccgggaacatcaaacgctaaaggtgcaacagccatagaagatgtttcaatagaacatgacgacaaaaag ccttttgcggatgtcattggcattgaccactcaggttatgaagttataaatccttcatttaggtctccagacgtttcgca caaatacgattcgttgaaaaaacgggacaatttacgggactcgctggctgagtccaaagaaatagaatctccaacaactt ga |
|
Protein
| Protein ID | pfu_aug1.0_11933.1_53761.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11933.1_53761.t1 MFNDTEASVVCRYLGYATGKSVCCSALGALTIDKQIEISRLSCTGTESNPQFCSKETNACSSRNYASVYCMTSVKTDNAT LTFPGTVPYGALTVNRHGLEGHICLDGFDDTDATIACESLNYGHGRKIKVMQRRRYPIIMGQVVCPQAISEFKFCQYNTF GTDPMCTSSDDVAGAICYNNATQSITKVTLAQTSSDNVTVIVAVIVSCCVLLIVVIIVVAVFLKCRNREGTKGVYNEAVL QRKADGSFHAQNPLHDINIDNDGEARVHIDRQGSVVEYSPTPKVDVPQSYSNFLYESPGTSNAKGATAIEDVSIEHDDKK PFADVIGIDHSGYEVINPSFRSPDVSHKYDSLKKRDNLRDSLAESKEIESPTT |
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