Gene
| Gene Model ID | pfu_aug1.0_1195.1_58404 |
|---|---|
| Locus | scaffold1195.1 : 17076 ... 26239 : + |
| To GenomeBrowser | scaffold1195.1:17076..26239 |
| Genes list of scaffold | scaffold1195.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1195.1_58404.t1 | 1 | 1 | UMP1 | 59 | 120 | 3.1e-14 | 53.0 | 2.4e-18 | 3.6e-14 | 52.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1195.1_58404.t1 | gi|156397211|ref|XP_001637785.1| | predicted protein [Nematostella vectensis] | 3.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 2 |
| mantle | 2 |
| mantleEdge | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1195.1_58404.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1195.1_58404.t1 atgttaacgtacgaaaacgaacattggatcttaaaatcggaaactcagcgttgcatttacgaatgcagctgcacatgtgc attcaaggaaaagaacattccttatccctctgtgcgacctcagccttctggctcacaggaagtcaaggtcaaggaaggtc catatggtgtcccagacgttatgcttaatggtcttcacagcagcagagagagtacatcagctgtccacccattagagcac tccgaaaaacattggaatgaaaacaaatgtcagatggactttgccatgttaagaaagatggaggggatccatatgccact tagattacaaatggagaacaatatctcactaaaagtaagtcttcccacttag |
|
Protein
| Protein ID | pfu_aug1.0_1195.1_58404.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1195.1_58404.t1 MLTYENEHWILKSETQRCIYECSCTCAFKEKNIPYPSVRPQPSGSQEVKVKEGPYGVPDVMLNGLHSSRESTSAVHPLEH SEKHWNENKCQMDFAMLRKMEGIHMPLRLQMENNISLKVSLPT |
|