Gene
| Gene Model ID | pfu_aug1.0_1195.1_58407 |
|---|---|
| Locus | scaffold1195.1 : 78556 ... 87838 : + |
| To GenomeBrowser | scaffold1195.1:78556..87838 |
| Genes list of scaffold | scaffold1195.1 |
| Synonym | pfu_aug2.0_456.1_20794 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | fgf19/21/23-like |
| Description | NCBI BLASTP hit to ref|XP_003226252.1| [Anolis carolinensis] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1195.1_58407.t1 | 1 | 1 | FGF | 27 | 125 | 1.0e-10 | 41.4 | 1.5e-14 | 2.2e-10 | 40.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1195.1_58407.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1195.1_58407.t1 atgggggcacctgctagtccaagactattcaacggggtcaatccggaaattgataccaataaggaaattaaaactttctt tatgaggacgaaaaacgaaaaagtgctagaaattttagaagatggaacagtgcgaggatccgattgtgcaaatagtccca ccagatattcattgttagaaagtggatctcactgtcacagtacacgtaatgtattgatggtcaccttgttcggaaaggcc gccgagaggtttctctgcatccataaaaacgggacagtttatgcaaccaagagggagaatttctcggaggatgattgtgg ttttaacgtgattctggatagcagaggtagtgaactttaccctcgcgggaaatacaaacacgctgttcacggaagaccgc cacctagcggcaagggactgcgtcgttaccaactggctttaacgtgtagtaatgtggctatgtcgatatatacggggaga gataggaggaaacttataaacgatactctttttatagaagaaaaagtggacgcaaaagtagaaagccttaatgaatcttg tgatgttcgaacgactaaaaagtgtaaacacaatcattggtgtccagaattctacgatgtgaaaggtaggacgtatgtga aattctgtcgacgcgtcgtgaagaatttctttagtgccactttaagagattttaggttattccataaaagagattgttgg aatgtgttgaaaaaagtgcgactgtgtagagaaaggcggacaaaccgacactccggacagactcgccgacgtagacggag acatcaccacggaccatcccggggaaaacgatcggaccaagttgtagacttcgataagattctgcctcgttgtgtcccca cgtga |
|
Protein
| Protein ID | pfu_aug1.0_1195.1_58407.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1195.1_58407.t1 MGAPASPRLFNGVNPEIDTNKEIKTFFMRTKNEKVLEILEDGTVRGSDCANSPTRYSLLESGSHCHSTRNVLMVTLFGKA AERFLCIHKNGTVYATKRENFSEDDCGFNVILDSRGSELYPRGKYKHAVHGRPPPSGKGLRRYQLALTCSNVAMSIYTGR DRRKLINDTLFIEEKVDAKVESLNESCDVRTTKKCKHNHWCPEFYDVKGRTYVKFCRRVVKNFFSATLRDFRLFHKRDCW NVLKKVRLCRERRTNRHSGQTRRRRRRHHHGPSRGKRSDQVVDFDKILPRCVPT |
|