Gene
| Gene Model ID | pfu_aug1.0_11953.1_60963 |
|---|---|
| Locus | scaffold11953.1 : 445 ... 6825 : - |
| To GenomeBrowser | scaffold11953.1:445..6825 |
| Genes list of scaffold | scaffold11953.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11953.1_60963.t1 | 1 | 1 | FMO-like | 7 | 282 | 0.0 | 262.2 | 0.0 | 0.0 | 261.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11953.1_60963.t1 | gi|147902708|ref|NP_001087387.1| | MGC81930 protein [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11953.1_60963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11953.1_60963.t1 atgaggccagtccattaccatcgagtgaaccggagatacaaacactcaaactatggcctgtctccaaacttcagattcga cggcggtgcggtaacaattagtgacgatctaccgaacagaattttactgggtactataaatatcaaatgtgacgtcacca catttacggagcatggcgccaaatttgaagatggtacagaattgaaggatatcgacgttgtcgttctaggaacagggtac aacttcagctttccttttctggatgagggcattgtaaaagttgatggtcattttccatatctctatgaattagtctggcc gactcaattaaaccctccaaccttggcagtcataggtttggttcaaccattcggagctttaccgccaattttagaaatgc aagctcgatgggcatcactcgttttctcgggaaagtgcacgttacccagcgccggaaaaagagagagctttgtggagaaa agacgggcgtttatcaaagcaaagtacgtcgactctccaaggtacagtctacaaatatacttcatacaatatattgatag aatagcagaaagcatcggatgtaaacctcacctttggaagcttttcttcacaaatccctcactctggtataaagtatact tcggtccttgcactccgcctcaatggagacttggcggacccggaagctggaagggagcggctgattcgataatgaaagta gaagagaacacctggtatccgatcaaaacgcgcgctgccggaaaaggcgaaagagacggtttgtacgatggttgggtcaa attgttgaagaaaatcattgtcttcttgggtgtctttttcgtcctgcgatatgtcttttcaaatggctatgtcacattcc caatcaaaacttga |
|
Protein
| Protein ID | pfu_aug1.0_11953.1_60963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11953.1_60963.t1 MRPVHYHRVNRRYKHSNYGLSPNFRFDGGAVTISDDLPNRILLGTINIKCDVTTFTEHGAKFEDGTELKDIDVVVLGTGY NFSFPFLDEGIVKVDGHFPYLYELVWPTQLNPPTLAVIGLVQPFGALPPILEMQARWASLVFSGKCTLPSAGKRESFVEK RRAFIKAKYVDSPRYSLQIYFIQYIDRIAESIGCKPHLWKLFFTNPSLWYKVYFGPCTPPQWRLGGPGSWKGAADSIMKV EENTWYPIKTRAAGKGERDGLYDGWVKLLKKIIVFLGVFFVLRYVFSNGYVTFPIKT |
|