Gene
| Gene Model ID | pfu_aug1.0_12.1_36216 |
|---|---|
| Locus | scaffold12.1 : 87006 ... 98627 : + |
| To GenomeBrowser | scaffold12.1:87006..98627 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug2.0_136.1_20308 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36216.t1 | 2 | 1 | PLAT | 26 | 62 | 1.6e-11 | 44.6 | 0.3 | 1100.0 | -0.1 |
| pfu_aug1.0_12.1_36216.t1 | 1 | 1 | GPS | 278 | 310 | 6.3e-07 | 29.4 | 3.9e-10 | 1.5e-06 | 28.2 |
| pfu_aug1.0_12.1_36216.t1 | 2 | 2 | PLAT | 369 | 449 | 1.6e-11 | 44.6 | 4.3e-14 | 1.6e-10 | 41.3 |
| pfu_aug1.0_12.1_36216.t1 | 3 | 1 | PKD_channel | 497 | 543 | 0.0 | 227.9 | 0.81 | 3000.0 | -3.8 |
| pfu_aug1.0_12.1_36216.t1 | 3 | 2 | PKD_channel | 626 | 660 | 0.0 | 227.9 | 0.22 | 820.0 | -1.9 |
| pfu_aug1.0_12.1_36216.t1 | 3 | 1 | Ion_trans | 644 | 644 | 5.1e-10 | 38.9 | 0.43 | 1600.0 | -1.9 |
| pfu_aug1.0_12.1_36216.t1 | 3 | 2 | Ion_trans | 738 | 773 | 5.1e-10 | 38.9 | 0.022 | 83.0 | 2.3 |
| pfu_aug1.0_12.1_36216.t1 | 3 | 3 | PKD_channel | 811 | 1179 | 0.0 | 227.9 | 0.0 | 0.0 | 227.9 |
| pfu_aug1.0_12.1_36216.t1 | 3 | 3 | Ion_trans | 968 | 1169 | 5.1e-10 | 38.9 | 1.4e-13 | 5.1e-10 | 38.9 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36216.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36216.t1 atgaaaaataagtgtcggttaattcaatgcgccgaggaatctgttccaaatgtactgaatgccatagaatcatcgtacaa tgtcaaactgcagacgacagaagttggtgccggaccttccaagattatcagaccgaatctagagctcagtgttgagaaag tgacaaaggaaatcttacaaaacagaacagaaactccaataaaaggaatcaagctttccctggaccaaaacgataccgag gctatacaaggaacactcgatataaagcaaacagtgtttgataagccacctacaatatacggagacggcatagcatcttt aacatcaagagccttacagttagaactcagcaacaagagtatcataccgaacttatcgtttgaaaataagcaaactgcct atgcaaaccggtttgaaccacaaatgacggcaggggacccagaacaaatgttttacctgaattttgacgtcaaaaacgat gacgatgttgcgttagtgtacgtggagcctgacaattttgatatctacaacaggaatacttggacgttgtatgagctata ctatcgtgcagcgacatttccaaagacctcaatcttcagcttctataaagagttttctataagagactacacagaaggac tcggattcaaagtcatgattcctcctatgaagaaaggccaacatttcctgggattcaaggctctgtccgtcccagaaccc tctaagcgaaggaaacgccggtctgtggccgttgacaatacaacaacagtggctccaagcaacactaccaatcaacttat aaatgttaacgttagtgtcgtccttgtcacaaccggatgtagatcctggaacgaggctgagaaaaagtgggtttcagatg gatgcacggttttgcctatgtcaacgccaaacgagaccgtatgccgctgtccacgagccgcagggaacttatttgcaacg acgttctacgtgcctcctaatacaatagactttgctacagtgttcagcaagtttgatgcatctaatgccgctatatatgg cacgtgtattgccctgatcgtggtgtggataattgctgtcgtactgttacggcgacaagacctcaaagatcaagaaaggg gttttccgactgggagtgtacgttcatttttcatgggcaccaagtatcccctaggcgaccttacttacctaaggatctgg catgataacagtggagagggaggggaacaatcatggtacctaaacaaagtgacggtagatgatccacagagacatgccag gtataccttcatttgtgaaagatggttggccgtggaacgtgacgacggacaagttgaaagagtgctaccagtctgcggcc gtgagaacctattacaattcaatacgcttttcttccaacatgcacagttcaatataacagagaatcacctatggctgtca ttgttaatccgacctcagagaagcagcttcactcgagtccagcgtgcatcctgcatactcgccttgttattcctaaccat gatcgccaacgccatgttcttccggtcctcaagtgaagaagtcaatccgaacgaggttcagatcggtatattgcggttct ctatgagcatcctgtttatatcaatcattggtatccttatcaccacaccgccaatcttgatagtgacaatcatattcaaa aagtgcaaaccaaaaccagtcaccaatagacacaaagagattaaggacaaaatgaaacaacaggtattaaattcaatgac aaaggaaactcagcagatgttgagaagcgaggagttgttctcttctgaccaccttcctctaccgtactggacagtgtaca tcgcctgggtcatcgttgctatagccgtggccacctcggcattctttctgcttttatacagcatgcagtggggcaaaagt aaatctgaggaatggctatcttcgtttgttttctcattcttcgagtcgctgcttcttgtggatccattcaaggttgttgt gattgcattgatcttcgccattctgttcagacgtcctgtagatgggagtagtccaaaggttaatatggagaggcttcggg acgcttcaatggctttcagtgctggatctacacgaacttatctagctctttggaacgatgtaataatgaagaacaagaaa acttcagaggaagagctgaagaaggttcggaagaggcgagagcaggagcttcgtgctatggatgctttaatgaatttgat catgtatggcgtgtttgtgttcatcctgtacagcattagctatgtcaatagggaccagagatctttcttcctgaaaaaca acgtggacaactaccttcacgcccatggctttggccaagttggattctcctcggtcttctcatctattccagatggatgc gtgtacaagaagctgacttggccgtatccttgtgtaaatccatacaaccaatacaatgaagatgaatcggactactggct tgaatggaaaccttataacgccacgctgtataacactcctgcctataccaacatacacctcaccgccgacgcctggaaat acacaaaatcaaaggacatatggggcataccaataactggacaatacgctacatacggcggtggagggtacttgctcaag tttcccaaggatcgtattctatctgaacgtatgctgaatgagctgatggagtttaactggatagaccggggtactcgtgc cgtgtttatggagtttactttgtataatgccaatacgaatctgtttctttatgctcagtttttggcagagttctcggagt tgggaggagcttttaactggatagaatctcaagctttccgtccagtcactactgtcagtggtgtaggggctttttccttg ttgtgctacattttattttgttttcatctcatcattacaactgtaaagacagttctcaggatgaaaaaattaggctgcaa atcatttctgttcgatccttggaacgtcgtggactcgttctgcgttttccttagttatgctttgatctttatgttcgggt tcagattgagctacgcaaatcaggccatgcaaaagtattatgatgacctaggaacaggtgcccgagatttcatcaacttt caacacattgtggtgtgggacaattctttcaatgtagtacttgctactctggtatttatagccaccattcgtatcctacg gattttggggtataacaaaaggttttccgaggtcgccagcgtcatctctcatgccgctggtgagttaatgggctttagtg tggtttttgggatcatctattttgcctacatcagtcttggttaccttttatttggagtatcactcaaagaatacagaagt ccttttgccacatggggaagccttacaaatgccttgataggaaaaaacagcctggacaaaatgttagcggtggcaccaca gatggcacaattctactattttacatacgtattctgcgtcttgatgacgcttgctaccatgtttgccgccatcttgaaca agagtatatcggaggtccgtgcagaatcatcaaaagagccggaaacattcggaatcacgaatcttctgaccaaatcaatt caggatgtttttggttttgcatcaaagagcaaaaacaagaatattcaacgaaaaaaatacacgccgattccgggtaaaac gaattttgatgctccaaacatcttgcgtttggtgagggagacattcggcgaatacgacgacgacgaaaagaatcgagcac gttgaaaccgataccggaagcggaagtggagagtggaatggcgaaaaagctaa |
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Protein
| Protein ID | pfu_aug1.0_12.1_36216.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36216.t1 MKNKCRLIQCAEESVPNVLNAIESSYNVKLQTTEVGAGPSKIIRPNLELSVEKVTKEILQNRTETPIKGIKLSLDQNDTE AIQGTLDIKQTVFDKPPTIYGDGIASLTSRALQLELSNKSIIPNLSFENKQTAYANRFEPQMTAGDPEQMFYLNFDVKND DDVALVYVEPDNFDIYNRNTWTLYELYYRAATFPKTSIFSFYKEFSIRDYTEGLGFKVMIPPMKKGQHFLGFKALSVPEP SKRRKRRSVAVDNTTTVAPSNTTNQLINVNVSVVLVTTGCRSWNEAEKKWVSDGCTVLPMSTPNETVCRCPRAAGNLFAT TFYVPPNTIDFATVFSKFDASNAAIYGTCIALIVVWIIAVVLLRRQDLKDQERGFPTGSVRSFFMGTKYPLGDLTYLRIW HDNSGEGGEQSWYLNKVTVDDPQRHARYTFICERWLAVERDDGQVERVLPVCGRENLLQFNTLFFQHAQFNITENHLWLS LLIRPQRSSFTRVQRASCILALLFLTMIANAMFFRSSSEEVNPNEVQIGILRFSMSILFISIIGILITTPPILIVTIIFK KCKPKPVTNRHKEIKDKMKQQVLNSMTKETQQMLRSEELFSSDHLPLPYWTVYIAWVIVAIAVATSAFFLLLYSMQWGKS KSEEWLSSFVFSFFESLLLVDPFKVVVIALIFAILFRRPVDGSSPKVNMERLRDASMAFSAGSTRTYLALWNDVIMKNKK TSEEELKKVRKRREQELRAMDALMNLIMYGVFVFILYSISYVNRDQRSFFLKNNVDNYLHAHGFGQVGFSSVFSSIPDGC VYKKLTWPYPCVNPYNQYNEDESDYWLEWKPYNATLYNTPAYTNIHLTADAWKYTKSKDIWGIPITGQYATYGGGGYLLK FPKDRILSERMLNELMEFNWIDRGTRAVFMEFTLYNANTNLFLYAQFLAEFSELGGAFNWIESQAFRPVTTVSGVGAFSL LCYILFCFHLIITTVKTVLRMKKLGCKSFLFDPWNVVDSFCVFLSYALIFMFGFRLSYANQAMQKYYDDLGTGARDFINF QHIVVWDNSFNVVLATLVFIATIRILRILGYNKRFSEVASVISHAAGELMGFSVVFGIIYFAYISLGYLLFGVSLKEYRS PFATWGSLTNALIGKNSLDKMLAVAPQMAQFYYFTYVFCVLMTLATMFAAILNKSISEVRAESSKEPETFGITNLLTKSI QDVFGFASKSKNKNIQRKKYTPIPGKTNFDAPNILRLVRETFGEYDDDEKNRARXNRYRKRKWRVEWRKS |
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