Gene
| Gene Model ID | pfu_aug1.0_12.1_36217 |
|---|---|
| Locus | scaffold12.1 : 100397 ... 109225 : - |
| To GenomeBrowser | scaffold12.1:100397..109225 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug2.0_136.1_20309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36217.t1 | 2 | 1 | Branch | 128 | 149 | 2.8026e-45 | 154.5 | 0.4 | 5900.0 | -3.9 |
| pfu_aug1.0_12.1_36217.t1 | 2 | 2 | Branch | 176 | 435 | 2.8026e-45 | 154.5 | 0.0 | 4.2039e-45 | 153.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36217.t1 | gi|72009489|ref|XP_784257.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36217.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36217.t1 atggcagatagaatagctcgaattttctttgatacttatgaagaaatacaaagaagaagacagacgcatatccaagaaga cgagccacagatacatcatctgaccggacctgtatgtcggttacatagtatgaggaaaacctgctcactcaaacagattt tcgcgcttttatgtgtgacactggccgtggtaacactctcaaatatactgtcttccgttcctgttgatttgaataaagta tcatcgttagaggtaaatctaaatggcgtcaagttggataccaaaagggaggtggagggtggtcatatagttggaccaaa gaaaagagtttacaaagtatcatgtgccaaagtcatagaaggtgacaagacagaaataacaaaagcacaaacattgatgc gtgaaacaaaatcatttcgaataagtgatgagagttttattaatttgacgcgtgattgtcagagatttagggaatcaaga gattatgacacaattccagtttcaaaggaggaacttgaatttccgattgcttacaatctcctcttatatcgagatgtaga tcaaacagaacgactcttaagggcgatttatcgaaagcaaaatatctactgtcttcatgttgacgctagtgcgtcacttg cggtacgtaacgcaatggcggcaatagcggggtgtctgaaaaatgtatttatggtgtcgcatgccgaggacgttatttac gagggattttcacgtctcaaagctgatcttaattgtatggaagatttaatgaagaaagacgtgcaatggaaatatctcat caatatacctagtcagcagtttccccttaaaaccaacctagaaattgtcaaaatcttaaagatttacaatggctcaaacg atattgagggaataaccgttcctggtaggatgtacagtgttcggtacaaatttaagcataaaatgtcagcgacgaagacg ttggtgaggacttcagagaagaaggagccgcctccgcataatataactctagtcaaaggtagtgcttatggagtgttcag tcgtgcctttgtcaaattcattcttgaggacaaaatggcacatgatttactcgagtggacgaaagaagttagaagtcctg atgaatactattgggccactttaaatcacaataaagttatcaaagcaccgggctcttatacagcaggtataccagacaag aagccgtggttggctgtgtacgcagcatggggtggcgctaacccgtgtcacggcaagtttgtcagaggagtgtgtgtgtt tggtgtagaagatctcaacgaactggtgtccaaaaaggaactgttcttaaacaaactttatatcgactatcagcctctga cgatggactgtctagaagagtatatatataacaaatcgtttagtaacattccattcaaaacattttattacaaaaatttg ccatttgtccggaaaagctaa |
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Protein
| Protein ID | pfu_aug1.0_12.1_36217.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36217.t1 MADRIARIFFDTYEEIQRRRQTHIQEDEPQIHHLTGPVCRLHSMRKTCSLKQIFALLCVTLAVVTLSNILSSVPVDLNKV SSLEVNLNGVKLDTKREVEGGHIVGPKKRVYKVSCAKVIEGDKTEITKAQTLMRETKSFRISDESFINLTRDCQRFRESR DYDTIPVSKEELEFPIAYNLLLYRDVDQTERLLRAIYRKQNIYCLHVDASASLAVRNAMAAIAGCLKNVFMVSHAEDVIY EGFSRLKADLNCMEDLMKKDVQWKYLINIPSQQFPLKTNLEIVKILKIYNGSNDIEGITVPGRMYSVRYKFKHKMSATKT LVRTSEKKEPPPHNITLVKGSAYGVFSRAFVKFILEDKMAHDLLEWTKEVRSPDEYYWATLNHNKVIKAPGSYTAGIPDK KPWLAVYAAWGGANPCHGKFVRGVCVFGVEDLNELVSKKELFLNKLYIDYQPLTMDCLEEYIYNKSFSNIPFKTFYYKNL PFVRKS |
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