Gene
| Gene Model ID | pfu_aug1.0_12.1_36224 |
|---|---|
| Locus | scaffold12.1 : 220026 ... 259689 : + |
| To GenomeBrowser | scaffold12.1:220026..259689 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug2.0_136.1_20313 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36224.t1 | 9 | 1 | SapB_1 | 26 | 38 | 0.0 | 162.8 | 0.19 | 720.0 | 0.1 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 1 | SapB_2 | 43 | 76 | 1.4e-25 | 88.8 | 0.00078 | 2.9 | 8.0 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 2 | SapB_1 | 107 | 144 | 0.0 | 162.8 | 1.5e-11 | 5.4e-08 | 32.4 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 2 | SapB_2 | 152 | 178 | 1.4e-25 | 88.8 | 3.2e-09 | 1.2e-05 | 25.2 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 3 | SapB_1 | 202 | 238 | 0.0 | 162.8 | 1.1e-07 | 0.00039 | 20.1 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 3 | SapB_2 | 247 | 272 | 1.4e-25 | 88.8 | 9.3e-08 | 0.00034 | 20.5 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 4 | SapB_1 | 292 | 328 | 0.0 | 162.8 | 1.0e-10 | 3.7e-07 | 29.7 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 4 | SapB_2 | 338 | 362 | 1.4e-25 | 88.8 | 0.0011 | 4.1 | 7.5 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 5 | SapB_1 | 389 | 426 | 0.0 | 162.8 | 1.0e-06 | 0.0039 | 16.9 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 5 | SapB_2 | 438 | 460 | 1.4e-25 | 88.8 | 2.3e-06 | 0.0087 | 16.0 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 6 | SapB_1 | 484 | 521 | 0.0 | 162.8 | 4.4e-07 | 0.0016 | 18.1 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 7 | SapB_1 | 530 | 567 | 0.0 | 162.8 | 3.0e-12 | 1.1e-08 | 34.6 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 6 | SapB_2 | 579 | 601 | 1.4e-25 | 88.8 | 0.00023 | 0.87 | 9.6 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 8 | SapB_1 | 684 | 720 | 0.0 | 162.8 | 7.0e-10 | 2.6e-06 | 27.1 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 7 | SapB_2 | 731 | 748 | 1.4e-25 | 88.8 | 0.00032 | 1.2 | 9.2 |
| pfu_aug1.0_12.1_36224.t1 | 9 | 9 | SapB_1 | 786 | 821 | 0.0 | 162.8 | 1.7e-07 | 0.00064 | 19.4 |
| pfu_aug1.0_12.1_36224.t1 | 8 | 8 | SapB_2 | 828 | 860 | 1.4e-25 | 88.8 | 0.0054 | 20.0 | 5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36224.t1 | gi|198433498|ref|XP_002129919.1| | 2.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36224.t1 atgacacgctttcatctcctgcaaatttccaatgacggagacttacagaggaccaaagttgcaagctgtatgggcaatgt tgaaagtaaactggaggatatatgtaacagattgacagctgatgtagacgtgtgtcttaattttgtccattcaaatattg gaaagatatttggtacattaactcaaaaaatggatcccgaagaagtgtgtattttacttgatgtatgtccaaaaagcgaa cgtctagtgatcaaagagccagaagaaataatagaaacacacaaggagacatcaaacccgaaaaaagtggataacgtcgt agaatgtgagatatgtaaactgttgatagtagaacttgaccgttacatcaagaataactcctctgaatccgccatcaaca aaacggtaacagagttctgcaacaaattgccatcagctctaaaaacattttgtttgacatatgagcctaagatggtacaa gcattagtttctggtctcgatccaaccaaggcctgtgccaaggtcaaattgtgttcttctgaggagtatgatgatgagag tgaaagaaagccattcgtacctagcctagggaatgtaactttaggatgtgaaatatgtaagcttttgattaccgaggttg acagccttctacaacagaacaagtcggtcatcgccatcaacacaacattgtataaagtgtgcgatgcgctacctgcgtca ctcaagctgttttgtactacctacgaaccacagatccttagcactctatctcaaggagctgatccaactaaagcatgcca aactataaaactttgttcgatggatcaaagcaaatctctcaaagagttgatggtgccgcctttgcaggatgcaaaatgtg aagtttgtgagttcttggtgactactattgatcaattcatcactaaaaacacgactaaggaacaaattaacagtacagta tacagtctctgtaacattctacccgatgcaatcaaagcaacgtgtgaattatttgcaccacaactagtacagaaggttga aaagggactggaccccgagcatgcatgtattgatttaaaagcatgtccaaataccaccgatatatattatgagaaggaac aactgccaacttatattgtcaagaaccaagaggaggaagaggataccaaatgtgatgtgtgtgagtttgtatgtaatctg attgaccagtttatagaaaggaactcatctgcttctaagatcaatagtactgtttattcactgtgtgccctcctaccaga tgctgtcaaagtcacttgtgatcttatcgcaccgacagtagtcaaatctttagagaacggactagaccctggaaaagcgt gtgccgccgtaaaattatgcccaaatgcctctgagatttactatgaggagcaagaagttccacgcaagattgtcgagaaa gaacgggatacgaaatgtgatgtttgccaattcctatgtaatctgattgaccaatacatagcaaagaactcctctgaagc cacaatcaacagtaccatttatagtctatgtaacgcgctaccagacgccgttaaagcaactgctggtgagttttgtgagt tatgcgagtttgttgtccagcttgttgactcttacctagagaggaatgcatcatctgacaaaataaacgcaacaatcatg ggcgtttgtaacgttttaccagcagaactcaaattgttttgtgacgaaattgccccgaagttggtcagtgctctaattgc tggaatagacccagttaaagcttgcacagaaatcaatctttgtgttaatggttcttttgagtatatgggaagcttgccta gcttaccatgtgacatgtgtattgcggctatcgagggtgggaatccaatgcagttcaacgaagaggtggccttcagagca tgctcaaagatctgtgtggaacaacagcatcaacatatcgtgaagaaaagatctgtgaagaagtttacagaatccataga gaaagaggcacttgttttaggaaagaaagagcatataggagaagactgggaatgtgatgtgtgtgtatggttagcagaag cggcaaatattttcctcaaagacaacaaaacagaaagcagcatcgccaataacttgaattctctatgcagattcttgcca cagccctacgacaaagtgtgtaaagacacaacgcctaccattgtcaaagagctggaacacggcgttgatcctaagaaatt atgcatagaaattatggatgacgacgactgcaaaaatttgacatctaagaagctgccatcaatatcccagtccctgctgg acagagtccggttgatggggaagatgaccgcatcagaggagtgtaacctttgtaaggacgttatatcagctatacgcggt gatcttgaccaatctacggaaagtgtgaaaaaatatttggaagatacatgtaaccgtatgccagaaccaacaaataatgc ctgttctactctcatcgacaaggaatatgaagcactgtttaacaaaatcatcaagaagctgttagatcccgattctacct gccacatactgagagtctgttga |
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Protein
| Protein ID | pfu_aug1.0_12.1_36224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36224.t1 MTRFHLLQISNDGDLQRTKVASCMGNVESKLEDICNRLTADVDVCLNFVHSNIGKIFGTLTQKMDPEEVCILLDVCPKSE RLVIKEPEEIIETHKETSNPKKVDNVVECEICKLLIVELDRYIKNNSSESAINKTVTEFCNKLPSALKTFCLTYEPKMVQ ALVSGLDPTKACAKVKLCSSEEYDDESERKPFVPSLGNVTLGCEICKLLITEVDSLLQQNKSVIAINTTLYKVCDALPAS LKLFCTTYEPQILSTLSQGADPTKACQTIKLCSMDQSKSLKELMVPPLQDAKCEVCEFLVTTIDQFITKNTTKEQINSTV YSLCNILPDAIKATCELFAPQLVQKVEKGLDPEHACIDLKACPNTTDIYYEKEQLPTYIVKNQEEEEDTKCDVCEFVCNL IDQFIERNSSASKINSTVYSLCALLPDAVKVTCDLIAPTVVKSLENGLDPGKACAAVKLCPNASEIYYEEQEVPRKIVEK ERDTKCDVCQFLCNLIDQYIAKNSSEATINSTIYSLCNALPDAVKATAGEFCELCEFVVQLVDSYLERNASSDKINATIM GVCNVLPAELKLFCDEIAPKLVSALIAGIDPVKACTEINLCVNGSFEYMGSLPSLPCDMCIAAIEGGNPMQFNEEVAFRA CSKICVEQQHQHIVKKRSVKKFTESIEKEALVLGKKEHIGEDWECDVCVWLAEAANIFLKDNKTESSIANNLNSLCRFLP QPYDKVCKDTTPTIVKELEHGVDPKKLCIEIMDDDDCKNLTSKKLPSISQSLLDRVRLMGKMTASEECNLCKDVISAIRG DLDQSTESVKKYLEDTCNRMPEPTNNACSTLIDKEYEALFNKIIKKLLDPDSTCHILRVC |
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