Gene
| Gene Model ID | pfu_aug1.0_12.1_36225 |
|---|---|
| Locus | scaffold12.1 : 259707 ... 264695 : - |
| To GenomeBrowser | scaffold12.1:259707..264695 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug2.0_136.1_20314 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36225.t1 | 1 | 1 | RGS | 59 | 174 | 8.2e-35 | 119.4 | 1.5e-38 | 1.1e-34 | 119.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36225.t1 | gi|189233787|ref|XP_972835.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36225.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36225.t1 atgattgacaaactcgtatttttattctcgatatttttgcagttgcatacatcatattttcttcttgctgtcaaaaccgg aaatggttctaacaacggatcacgtgaccgaccattgcctctaccagaaaaagatgaacctccttctccagaagaaatag ctggatggggagaatcttttgataaactcatgaggagtagtggtggaaggaaagtgttccgggaatttttacgttcagaa tacagcgaggaaaacatgcttttctggttagcatgtgaggacttaaaacgggaagaaaatcccgaagtggtagaagaaaa agccagacttatatacgaagattacatttctatattatcaccaaaagaagttagtttagattctcgtgttagagaagtga taaacaggaacatggttgaccctacgccacatacatttgacgaagcacaattacaaatatatacgttaatgcatcgagac tcatatctaaggtttcttaattctcaaatttacaagaaatatttacaacaaaagggttaa |
|
Protein
| Protein ID | pfu_aug1.0_12.1_36225.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36225.t1 MIDKLVFLFSIFLQLHTSYFLLAVKTGNGSNNGSRDRPLPLPEKDEPPSPEEIAGWGESFDKLMRSSGGRKVFREFLRSE YSEENMLFWLACEDLKREENPEVVEEKARLIYEDYISILSPKEVSLDSRVREVINRNMVDPTPHTFDEAQLQIYTLMHRD SYLRFLNSQIYKKYLQQKG |
|