Gene
| Gene Model ID | pfu_aug1.0_12.1_36232 |
|---|---|
| Locus | scaffold12.1 : 345518 ... 352955 : - |
| To GenomeBrowser | scaffold12.1:345518..352955 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36232.t1 | 3 | 1 | Mito_carr | 3 | 70 | 0.0 | 193.8 | 9.0e-18 | 4.5e-14 | 51.9 |
| pfu_aug1.0_12.1_36232.t1 | 3 | 2 | Mito_carr | 76 | 176 | 0.0 | 193.8 | 9.5e-25 | 4.7e-21 | 74.3 |
| pfu_aug1.0_12.1_36232.t1 | 3 | 3 | Mito_carr | 184 | 272 | 0.0 | 193.8 | 2.8e-22 | 1.4e-18 | 66.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36232.t1 | gi|260824615|ref|XP_002607263.1| | hypothetical protein BRAFLDRAFT_125172 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36232.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36232.t1 atggctgttttctatccccttgatacagctagaacaagattacaagttgatgacaagaggcaagctaaatcaactcactt tgtcatagctgaacttattaaagatgaaggagtgacatcactatacagaggactgttccctgtgttagtcaccttgtgct gctcaaactttgtgtacttttacacttataatggtatgaaaactacattgcttggacctacatcaaaacctagcccagcg aaagacatgctgtttgcatttgttgctggctgtgtgaatgtgatcctaacaactccattatgggttgtcaatacacgact aaagctacagggagctaagttttataccagcaagcacaatgatgcaaaacttccaaaatacaaaggcattctggatgctt tgctgaaaatacgacgtcatgaaggcatttgctcgctatggaatggtaccttcccgtctctgattcttactgccaatcca tctatccaattcatggtgtatgaaactgttaaaagatacttccagcagcttttaaaaacaaaggagctgagcggtttcct gtactttatcatcggtgctatagcaaagactgtctctacaatagtcacttatcctctacaaattgtacagtcacgtctca ggactggtcttcacaagcacacagaatcaaaaaatctaattcagagtttaagagacttaataagagctgatggattcaag ggactgtacaaaggtatggaggccaaacttctacaaactgtcctcatgtcagctttcatgttcctcacttacgaaaaaat tgcagcatttatatttcacatgttcggtataagtaaggagtag |
|
Protein
| Protein ID | pfu_aug1.0_12.1_36232.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36232.t1 MAVFYPLDTARTRLQVDDKRQAKSTHFVIAELIKDEGVTSLYRGLFPVLVTLCCSNFVYFYTYNGMKTTLLGPTSKPSPA KDMLFAFVAGCVNVILTTPLWVVNTRLKLQGAKFYTSKHNDAKLPKYKGILDALLKIRRHEGICSLWNGTFPSLILTANP SIQFMVYETVKRYFQQLLKTKELSGFLYFIIGAIAKTVSTIVTYPLQIVQSRLRTGLHKHTESKNLIQSLRDLIRADGFK GLYKGMEAKLLQTVLMSAFMFLTYEKIAAFIFHMFGISKE |
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