Gene
| Gene Model ID | pfu_aug1.0_12.1_36234 |
|---|---|
| Locus | scaffold12.1 : 370586 ... 382000 : + |
| To GenomeBrowser | scaffold12.1:370586..382000 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug2.0_595.1_17623 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36234.t1 | 2 | 1 | ABC_membrane | 147 | 333 | 5.4e-36 | 124.4 | 1.4e-39 | 1.1e-35 | 123.4 |
| pfu_aug1.0_12.1_36234.t1 | 2 | 2 | ABC_membrane | 335 | 368 | 5.4e-36 | 124.4 | 0.018 | 130.0 | 1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36234.t1 | gi|345489380|ref|XP_003426124.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36234.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36234.t1 atgaacgacgtagggggtatatctgatgtctttaggtttgtgaccttccacctttattttcctgccattttagtacagtt tgtcctttgctggttcagtgataaagtacaggagtttgaacaagtcacctctgaagattgcttccgatttatattcaagt ttaccaagagaccaattcagttttacaaatttactttttgtcaggagtatttatattcgtcggtacgtaatttagtcaag gaaggcactgacgaaaatgacgaaaattgaatacagcagagttcttcggaaactccagccacagatggaatagaaatccg ctccatgaacaaagatggcactacgtacacggaggtcaacgtagtggacggcaagaaatgtcagccggccaagctactta atgctttagtgtctgcctactcccccatgtgccttatgacagctttctacaaacttatctttgatgtctttcagttcctt agtccacttattttaaagttattaatacagtttacctatgacaagtcagaattcctatggaggggatatttttatgccat tttgatgttagtggttgccattcttcagtcattcattctacaccagtatttccacggctgcttcttgctgggaatgagga tacgaacagctctcatatctgccatttatagaaagatgttgaatctgtctaacactgccaggaaaaatgccacagttggc gagatagtaaatctaatgtctgtggacgcccagagatttatggatctaatgacatatatacacaccatatggtccggacc actacagattattattgctttgtacttcctgtggcgagaacttggtgctagtgtatttgcaggatttgctgttatggtca tattgattccgatcaatgccctcatcgcaaaaaagaccagagatttacaggtcaagcaaatgaatatgaaggacaaaagg attaaactaatgaatgaggtgctcaatggaataaaggtatccttagtgacttttgctgtatatgtactgagtgacccaac aaatattctggatgcagagaaagcttttgtatcattgtccctatttaatattttacgttttccgatgtccatgttgcctc aagttatatccaacattgtacagactacagtatctctgaagagacttcaggctttcttgaacaatgaggaactggaccct aattgtgtgcaaagggacatcaacagcaaacattcaatcacagtggacaaagcctcctttacatgggaaaaagatgcaga gaaaactctcagcaagtaa |
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Protein
| Protein ID | pfu_aug1.0_12.1_36234.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36234.t1 MNDVGGISDVFRFVTFHLYFPAILVQFVLCWFSDKVQEFEQVTSEDCFRFIFKFTKRPIQFYKFTFCQEYLYSSVRNLVK EGTDENDENXIQQSSSETPATDGIEIRSMNKDGTTYTEVNVVDGKKCQPAKLLNALVSAYSPMCLMTAFYKLIFDVFQFL SPLILKLLIQFTYDKSEFLWRGYFYAILMLVVAILQSFILHQYFHGCFLLGMRIRTALISAIYRKMLNLSNTARKNATVG EIVNLMSVDAQRFMDLMTYIHTIWSGPLQIIIALYFLWRELGASVFAGFAVMVILIPINALIAKKTRDLQVKQMNMKDKR IKLMNEVLNGIKVSLVTFAVYVLSDPTNILDAEKAFVSLSLFNILRFPMSMLPQVISNIVQTTVSLKRLQAFLNNEELDP NCVQRDINSKHSITVDKASFTWEKDAEKTLSK |
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