Gene
| Gene Model ID | pfu_aug1.0_12.1_36235 |
|---|---|
| Locus | scaffold12.1 : 382096 ... 386472 : + |
| To GenomeBrowser | scaffold12.1:382096..386472 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36235.t1 | 1 | 1 | ABC_tran | 13 | 145 | 7.3e-22 | 78.1 | 1.5e-24 | 1.3e-21 | 77.2 |
| pfu_aug1.0_12.1_36235.t1 | 2 | 1 | SMC_N | 20 | 49 | 1.6e-06 | 27.5 | 6.2e-06 | 0.0054 | 15.9 |
| pfu_aug1.0_12.1_36235.t1 | 2 | 2 | SMC_N | 77 | 156 | 1.6e-06 | 27.5 | 0.00044 | 0.38 | 9.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36235.t1 | gi|328777607|ref|XP_003249371.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36235.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36235.t1 atgcaaagactacaattatttgaatttgcttatttcagtataagtttggagataccagaaggaagcttggtggctgtagt tggcagtgttggatctggtaaatcctcactcctctctgctatcctcggtgagatggaaaaactgaaaggttctgtcaatg ttaagggatcagtagcttatgtagcacagcaggcatggattcagaatgccacactacaggataatgttttattcggtaaa cctctgagtaaggaagagtatgctaaagttatagagggatgcgctctaacacaggatctagaaatactccctggtggaga tcagactgaaataggagagaaaggaatcaacttgagtggaggacagaaacagagagtgagtttggcccgagctgtatacc aggatgccgatatatacctgtttgacgacccactcagtgcagttgattctcatgttggcaaacatatatttgatcatgtg atctcatcagagggaatactgaaaaacaagacacgagtccttgtcacacacggagtgagcttcttgccaaaagtagattt gattgtgactttggtaaatggagagatctctgaggttgggacattccaagagttaatgacacatgccggagcttttgccg aattcctgaaaaattaccttgttaacgagttggaaaatgaagagaatctagaggcagatctgaatgatattgaaggtgag attaaaatccgtcctttttgcattcatcttgtttgtgaattatgtatatacatcaaaagcaagcgtatattccattcctt tgaatga |
|
Protein
| Protein ID | pfu_aug1.0_12.1_36235.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36235.t1 MQRLQLFEFAYFSISLEIPEGSLVAVVGSVGSGKSSLLSAILGEMEKLKGSVNVKGSVAYVAQQAWIQNATLQDNVLFGK PLSKEEYAKVIEGCALTQDLEILPGGDQTEIGEKGINLSGGQKQRVSLARAVYQDADIYLFDDPLSAVDSHVGKHIFDHV ISSEGILKNKTRVLVTHGVSFLPKVDLIVTLVNGEISEVGTFQELMTHAGAFAEFLKNYLVNELENEENLEADLNDIEGE IKIRPFCIHLVCELCIYIKSKRIFHSFE |
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