Gene
| Gene Model ID | pfu_aug1.0_12.1_36236 |
|---|---|
| Locus | scaffold12.1 : 387136 ... 397524 : + |
| To GenomeBrowser | scaffold12.1:387136..397524 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36236.t1 | 1 | 1 | ABC_membrane | 152 | 321 | 1.8e-08 | 34.1 | 9.0e-12 | 2.2e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12.1_36236.t1 | gi|260824459|ref|XP_002607185.1| | hypothetical protein BRAFLDRAFT_118636 [Branchiostoma floridae] | 6.02558e-44 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36236.t1 atgcaaattttccgagaatcgcttcgncgattcacggaatttgcacgcgaccaaccagaattatacacccatgaacacca aaaacaagtgtcaaagttatctaggatgaggaccatgtcacaaaccgactctagagaagatatccgacctcgcacaaact cagagttatctgcccattgcaagcctctgacttcttctcattcatctttggcaaagtctggagacattccccagtcacca tcctctccggggacaaaacgccccgccctgaagaggcaacaatcggagttctgtcatccctcagagaagattaaagaaaa ggaagcggtcatcaaacaggtggaagaaaagaagaaagaagataaacttattcaggcagagaaagtggagacaggaaaag tgaagatgaatgtgttttatgcttacctgaagtctataggcctggtattaagtatcgttataatcctgttctatatcctg tacaatgtatccagtgtgtactctaatatatggctgagtgagtggagtacagacaaacctatactgaaaaacggaacaaa cggcacggtgatccaggttatagatacagatcaaagggatctaaggctcggggtgtatggagctctgggatttatacaag gtgttttggtggctatatgtgctggtttgatggcatttggtggaatagtggcttccagaaagctgtttatgtcaatggct cgtgccgtattgagattctctatgacaatctttgatacgactccctgtggtcgtatcttgaaccgttttagtgaagacat tgctgatgtagactttgtcatgccattcacgatacgttctatgttaaataccatattacagactgtatttaatattggca ttattgtttataacattccattatgtgccacacccatcccatttcttggaatactctacttttttgtacaggtaggatat gtttcttctgtccaataa |
|
Protein
| Protein ID | pfu_aug1.0_12.1_36236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36236.t1 MQIFRESLXRFTEFARDQPELYTHEHQKQVSKLSRMRTMSQTDSREDIRPRTNSELSAHCKPLTSSHSSLAKSGDIPQSP SSPGTKRPALKRQQSEFCHPSEKIKEKEAVIKQVEEKKKEDKLIQAEKVETGKVKMNVFYAYLKSIGLVLSIVIILFYIL YNVSSVYSNIWLSEWSTDKPILKNGTNGTVIQVIDTDQRDLRLGVYGALGFIQGVLVAICAGLMAFGGIVASRKLFMSMA RAVLRFSMTIFDTTPCGRILNRFSEDIADVDFVMPFTIRSMLNTILQTVFNIGIIVYNIPLCATPIPFLGILYFFVQVGY VSSVQ |
|