Gene
| Gene Model ID | pfu_aug1.0_12034.1_17810 |
|---|---|
| Locus | scaffold12034.1 : 1077 ... 16462 : + |
| To GenomeBrowser | scaffold12034.1:1077..16462 |
| Genes list of scaffold | scaffold12034.1 |
| Synonym | pfu_aug2.0_8.1_26621 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12034.1_17810.t1 | 1 | 1 | IMPDH | 51 | 143 | 4.4e-20 | 71.8 | 9.4e-24 | 4.7e-20 | 71.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12034.1_17810.t1 | gi|94732689|emb|CAK04261.1| | novel protein similar to vertebrate IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1) [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_12034.1_17810.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12034.1_17810.t1 atggccgactatctaatcaccggtggtacaggttatgtgccagacgatggacagactggtgctcagctctttgcaaatgg ggacggaatgacctacaattctgaacaattgaaaaaaaaaacacttttcaaaatacatcattatttcaaggacttgacat ctgctttgactaagaagatatcactacgtgcccctctggtgtcctcgcccatggacacggtcacagagtcacagatggct attggtatggctttatgtggaggagtaggtgttattcatcacaattgtacaccagaatttcaagcaaatgaggtcagaaa ggtcaagaaatatgaacaaggatttatccttgaccctgttgtgatgtcaccaaagcacacggttcgtgatgtgaatgagg ccaagaaacattttggtttctcgggtatccctataacggctaacggtcacatgggagagaagttagttggtcttgttact cagagagatatagacttcctgactcaggaggagtttggtgtacccctgtcagatgagtatttatattcgtcggtacgtaa tttcgtcaagggcggcactgacgaaaatgacgaaaattggtacctgacgaataaaaaccaatttacagtatcatttgaga caatgactaataatgtagttaccttgacctcaacctttaacctactttttggttactcatactttggtcgctatatcttt agctctgtaaaggggtag |
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Protein
| Protein ID | pfu_aug1.0_12034.1_17810.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12034.1_17810.t1 MADYLITGGTGYVPDDGQTGAQLFANGDGMTYNSEQLKKKTLFKIHHYFKDLTSALTKKISLRAPLVSSPMDTVTESQMA IGMALCGGVGVIHHNCTPEFQANEVRKVKKYEQGFILDPVVMSPKHTVRDVNEAKKHFGFSGIPITANGHMGEKLVGLVT QRDIDFLTQEEFGVPLSDEYLYSSVRNFVKGGTDENDENWYLTNKNQFTVSFETMTNNVVTLTSTFNLLFGYSYFGRYIF SSVKG |
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