Gene
| Gene Model ID | pfu_aug1.0_12035.1_10405 |
|---|---|
| Locus | scaffold12035.1 : 22759 ... 42705 : - |
| To GenomeBrowser | scaffold12035.1:22759..42705 |
| Genes list of scaffold | scaffold12035.1 |
| Synonym | pfu_aug2.0_139.1_30270 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12035.1_10405.t1 | 1 | 1 | DUF1546 | 49 | 93 | 4.3e-07 | 29.9 | 5.8e-11 | 8.7e-07 | 28.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12035.1_10405.t1 | gi|291231878|ref|XP_002735891.1| | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12035.1_10405.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12035.1_10405.t1 atgtcctgtggatttttggtctcattcgtaaattctgaagctatatctactagccttatgcacataaatgcttacacgtt ttcgcaatcggtcctctacggagaaaacatttggtccagtcctatcaaccatataatgatgaacacagtacgcagtatga aggaagtcctttatgatcacactaaacctttctgttgtcattatggagctgtgatggggctgctaaacttaggatctaag acgttagaggatattctcattactcacttaccccattactggccccatttaatggcagccattgaggacacatcatactc caacatggccaccaaggcagatgcgcacaaagtctacggagctatgctgtgtgatttacccttccgaatgcgggaaaaat ttgagaaattccatgacatcacaatgcaatttcaatgttttaccaaggttcgaagcttgtttgtccgagaattgtgggaa gaattcatggagcaagtgaagatacagcagaaacttgacagggaaagaatggaaagggaacgaatgcagagacagataga ctatgaaaaacgtgaacgtgaaagacggctccaagaggagcatcatagacttatggaggctgggaagaaaaggttagagg aaatacgacaagctgagatagcaagagaaaaggaagaaatggagagactagagcatgaacagagaagaaataaaaagata gcggagcaaagaatttcaaaaatgttacaatcagacgatgaagatgatttcgaagatgaatttgtgccataccataagcc aaaaagatttcggcagcgcagcatggtacagtattcagaaatgcccgaggatgctgacgtagaaatgaggtcagatattt ccgatgaagaacaaggtagtagtgcatctgctgcttcaaatgtagatttggcagtcaaacctggtcaaggtatcaaactg aaaataattacacgaccaggaaagcatcatcccaatatcaaagtcaagacactagagcctactcataaagaggcaaaaaa gacatctcatcatccgcacaagacaaaatcttctccgcataatgtggaagcaaagcattctccgcattatcagagagagg ccaaaaattctccacacctttacaaagaatcgaagagttctcccctagcatacagagaatctaaggattcaccgcatcag agagaatctaaaagttcaccacacatatatcgtgaatcgaaagactctccgcactatagggagagcaaacactcccctca ttctcatagtgcttacaaggaagctaaaagctctcctcactcacatagggacgttaaagacccgaaacactccaaacgta agaaatcgggacagaaatcggatagaaaagatgaatttgagtttgaatctgacccagaggaggttccaccattttctttt aagtcacatcattactcctcagagggagagagtagtgatggcactggacagagaaaacctttgacactgaaactgaaagt gaaagactccagggaaatttcaccagattag |
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Protein
| Protein ID | pfu_aug1.0_12035.1_10405.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12035.1_10405.t1 MSCGFLVSFVNSEAISTSLMHINAYTFSQSVLYGENIWSSPINHIMMNTVRSMKEVLYDHTKPFCCHYGAVMGLLNLGSK TLEDILITHLPHYWPHLMAAIEDTSYSNMATKADAHKVYGAMLCDLPFRMREKFEKFHDITMQFQCFTKVRSLFVRELWE EFMEQVKIQQKLDRERMERERMQRQIDYEKRERERRLQEEHHRLMEAGKKRLEEIRQAEIAREKEEMERLEHEQRRNKKI AEQRISKMLQSDDEDDFEDEFVPYHKPKRFRQRSMVQYSEMPEDADVEMRSDISDEEQGSSASAASNVDLAVKPGQGIKL KIITRPGKHHPNIKVKTLEPTHKEAKKTSHHPHKTKSSPHNVEAKHSPHYQREAKNSPHLYKESKSSPLAYRESKDSPHQ RESKSSPHIYRESKDSPHYRESKHSPHSHSAYKEAKSSPHSHRDVKDPKHSKRKKSGQKSDRKDEFEFESDPEEVPPFSF KSHHYSSEGESSDGTGQRKPLTLKLKVKDSREISPD |
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