Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1207.1_65882
Locus scaffold1207.1 : 37266 ... 48011 : +
To GenomeBrowser scaffold1207.1:37266..48011
Genes list of scaffold scaffold1207.1
Synonym pfu_aug2.0_554.1_14303

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1207.1_65882.t1 gi|291224212|ref|XP_002732097.1| PREDICTED: IQ domain-containing protein D-like [Saccoglossus kowalevskii] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
maleGonad 2

Transcript
Transcript IDpfu_aug1.0_1207.1_65882.t1
Definition-
>pfu_aug1.0_1207.1_65882.t1
atggcggcttcaaacgtgatgcctgctgggatgacaaccactgaaaccatcggtgttgaaccgacattgcatatgaaact
tcaaatgcctcatcctccaaatagtaaatatcctggaccgggtggtggcatgagtaaaatgaggcaaaagttaaggcttg
acccctccagggcattagagcctgcaagaaagaaaattgcaactatagaggctcagcgtgttatgtccgtatttgaggac
acaataacaaaaacggagattgtgacactgcttccgtttattttagaaaatcgagaaaggtttcgtgtaagccttggtgc
agagctttcccttttgttagacattcataaaaacactgttgatagttatgaagaaataaaacaacagcttgatattcagt
tacgtagaaataaagaaccgtccagagctgtgccaagatcgcccaacgatctccaatcagacatccaggatgacacattt
catgatacaactggcgagagaggggtaaccacagaaggcgaagaaatgagtcctcccgcaagtccaaatgatggcaaagc
tactaccacaggtcgcagtagtgcaggaagtaacaggtcagaagttcagtcagtaatgagctacgacagtcaaacagagc
gcaccatgagaaatcttagtcttgtggcacagcagttgtctagctcttgtaagaacatacttagagcgttttctgccaat
ccaaatgtgctgagcatgataaagaatcaagctagaagagatcccttgagtaaaggggtatgtactcaactgaatgagct
gaaggacattttaatgaacaagcttttgactactccagaggaagaaaaggaacgcatgctatacatacaagaaatatcaa
agagagagaggcacaatgctggaatcattgatgacctggagaccaaactgaaagctgctatggatgacaaagatgatgag
ataaagaagaaaaatgcagtgattaggaagcttcaggctgatctacgacaaatcgaaaagttctcagaggaaaataataa
acgagtaaccaatgaagcagagaaacaggagtcagctgaccttaagaatagtgatggcaagaagcagaggctgactcaag
agctgaatcagctcaaaacacaactccaaaatctgataatggagcacagggaaaatgagcaggaattgagaagaaaaaaa
ttccgtgtggagtcacaagtggagaattggatccagaagtatgatggagacatgaatgaaagacagacagagtatgagga
gatagatgccctgtacacaggagagaagaaacagctacatgagctggaggagagatttaaaacactagaggcagagtatc
aacagatcatggaggaacgacgcgtggccagggaaaaacgagaagctgccggtaaatag

Protein
Protein IDpfu_aug1.0_1207.1_65882.t1
Definition-
>pfu_aug1.0_1207.1_65882.t1
MAASNVMPAGMTTTETIGVEPTLHMKLQMPHPPNSKYPGPGGGMSKMRQKLRLDPSRALEPARKKIATIEAQRVMSVFED
TITKTEIVTLLPFILENRERFRVSLGAELSLLLDIHKNTVDSYEEIKQQLDIQLRRNKEPSRAVPRSPNDLQSDIQDDTF
HDTTGERGVTTEGEEMSPPASPNDGKATTTGRSSAGSNRSEVQSVMSYDSQTERTMRNLSLVAQQLSSSCKNILRAFSAN
PNVLSMIKNQARRDPLSKGVCTQLNELKDILMNKLLTTPEEEKERMLYIQEISKRERHNAGIIDDLETKLKAAMDDKDDE
IKKKNAVIRKLQADLRQIEKFSEENNKRVTNEAEKQESADLKNSDGKKQRLTQELNQLKTQLQNLIMEHRENEQELRRKK
FRVESQVENWIQKYDGDMNERQTEYEEIDALYTGEKKQLHELEERFKTLEAEYQQIMEERRVAREKREAAGK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495