Gene
| Gene Model ID | pfu_aug1.0_12075.1_17818 |
|---|---|
| Locus | scaffold12075.1 : 551 ... 12405 : - |
| To GenomeBrowser | scaffold12075.1:551..12405 |
| Genes list of scaffold | scaffold12075.1 |
| Synonym | pfu_aug2.0_450.1_00763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12075.1_17818.t1 | 2 | 1 | Ribosomal_S21 | 11 | 64 | 8.9e-10 | 37.8 | 1.8e-13 | 8.9e-10 | 37.8 |
| pfu_aug1.0_12075.1_17818.t1 | 2 | 2 | Ribosomal_S21 | 69 | 80 | 8.9e-10 | 37.8 | 0.26 | 1300.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12075.1_17818.t1 | gi|13994257|ref|NP_114107.1| | 28S ribosomal protein S21, mitochondrial [Homo sapiens] | 2.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12075.1_17818.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12075.1_17818.t1 atgacgaagcatctcaagttctttgcgaggactgttctcgtaaaggacaataatgtagcacaagcttatcaaaatctaca gaggtttctgagagaggagaaagtcataaaaaatgttgacatgcagacgtggttcagaagaccatatgagaaaagagtgc tgttatctatagccaggtgtaaacgaatctacaacagagaaatgaataagaaagtggaatttgctcttagaaagaacaga aaagatccatttccaagatga |
|
Protein
| Protein ID | pfu_aug1.0_12075.1_17818.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12075.1_17818.t1 MTKHLKFFARTVLVKDNNVAQAYQNLQRFLREEKVIKNVDMQTWFRRPYEKRVLLSIARCKRIYNREMNKKVEFALRKNR KDPFPR |
|