Gene
| Gene Model ID | pfu_aug1.0_1209.1_65893 |
|---|---|
| Locus | scaffold1209.1 : 11106 ... 21194 : + |
| To GenomeBrowser | scaffold1209.1:11106..21194 |
| Genes list of scaffold | scaffold1209.1 |
| Synonym | pfu_aug2.0_866.1_21226 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1209.1_65893.t1 | 2 | 1 | Nop25 | 8 | 81 | 1.6e-10 | 41.1 | 1.1e-14 | 1.6e-10 | 41.1 |
| pfu_aug1.0_1209.1_65893.t1 | 2 | 2 | Nop25 | 144 | 194 | 1.6e-10 | 41.1 | 0.27 | 4000.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1209.1_65893.t1 | gi|346468237|gb|AEO33963.1| | 6.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 2 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1209.1_65893.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1209.1_65893.t1 atgagcgaaacgaagaaacgaaaatcaaaaaagaacagacaaacaaagaaatttttggtgtttgatgaacaagctcgaat ggaatatttaaccggatttagaaagaggcgcaaagaaagacaacaaaaagcaaaagaggaaaaagagctacagatgaaaa gagataagaaagaattaaagaatcagaggagagaactattaaagagaagtcaggattacaaagggaagaagaggaaggat ttacctgccatagatctagaagatgcaacagagcccactgtgcttgacttgcccgatcatacagtcactataacggatat atcagaaattgacttggcaggtcacaatgggcttaggttaggacagaatcaggcagccatagaaaaagatgaggatgaag gtaatttgggctcaggaaataaagcagtctctaaagatgaactcaaaaagtccctcaaacaactcaaaagaaaacagagc aatctcgactccagtcaacatccaagcaagaagaaattcagccatcataaacagcacaaacagtatgataaaaagacatt gatcaaaagacgcaaagacaaaaagacatatttacatcaaaagaagagaatgaaatgtaatacttaa |
|
Protein
| Protein ID | pfu_aug1.0_1209.1_65893.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1209.1_65893.t1 MSETKKRKSKKNRQTKKFLVFDEQARMEYLTGFRKRRKERQQKAKEEKELQMKRDKKELKNQRRELLKRSQDYKGKKRKD LPAIDLEDATEPTVLDLPDHTVTITDISEIDLAGHNGLRLGQNQAAIEKDEDEGNLGSGNKAVSKDELKKSLKQLKRKQS NLDSSQHPSKKKFSHHKQHKQYDKKTLIKRRKDKKTYLHQKKRMKCNT |
|