Gene
| Gene Model ID | pfu_aug1.0_1210.1_00646 |
|---|---|
| Locus | scaffold1210.1 : 1176 ... 13745 : + |
| To GenomeBrowser | scaffold1210.1:1176..13745 |
| Genes list of scaffold | scaffold1210.1 |
| Synonym | pfu_aug2.0_134.1_13656 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1210.1_00646.t1 | 1 | 1 | MoeA_C | 20 | 84 | 2.0e-15 | 56.5 | 1.5e-19 | 2.2e-15 | 56.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1210.1_00646.t1 | gi|260831502|ref|XP_002610698.1| | hypothetical protein BRAFLDRAFT_202591 [Branchiostoma floridae] | 5.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-4cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1210.1_00646.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1210.1_00646.t1 atgctgaatatacattgttacattgaatttggtgaactgcttgagaagtccgtttatttggatcccagaccagagtatca tcgtgttgtcctgcagtggctctatgatgatccagtacctgtcgcatcaagcaccggaaatcaaataagtagcagacttc tgagtatgcgcactgcaaatgcactattaatgcttcctccaaaaacagaaaagcggcagatgatggagaagggttgtctc gtagacgccatgattataggtcgtttgtga |
|
Protein
| Protein ID | pfu_aug1.0_1210.1_00646.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1210.1_00646.t1 MLNIHCYIEFGELLEKSVYLDPRPEYHRVVLQWLYDDPVPVASSTGNQISSRLLSMRTANALLMLPPKTEKRQMMEKGCL VDAMIIGRL |
|