Gene
| Gene Model ID | pfu_aug1.0_1211.1_43942 |
|---|---|
| Locus | scaffold1211.1 : 25856 ... 41516 : - |
| To GenomeBrowser | scaffold1211.1:25856..41516 |
| Genes list of scaffold | scaffold1211.1 |
| Synonym | pfu_aug2.0_976.1_21309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1211.1_43942.t1 | 1 | 1 | E1-E2_ATPase | 12 | 125 | 1.2e-11 | 44.1 | 8.0e-15 | 2.4e-11 | 43.1 |
| pfu_aug1.0_1211.1_43942.t1 | 1 | 1 | Hydrolase | 145 | 510 | 4.8e-13 | 50.0 | 4.2e-16 | 1.2e-12 | 48.6 |
| pfu_aug1.0_1211.1_43942.t1 | 2 | 1 | HAD | 147 | 450 | 2.8e-08 | 34.1 | 4.5e-07 | 0.0013 | 18.8 |
| pfu_aug1.0_1211.1_43942.t1 | 2 | 1 | Hydrolase_like2 | 254 | 341 | 8.2e-09 | 35.3 | 9.4e-11 | 2.8e-07 | 30.3 |
| pfu_aug1.0_1211.1_43942.t1 | 2 | 2 | Hydrolase_like2 | 375 | 416 | 8.2e-09 | 35.3 | 0.061 | 180.0 | 2.1 |
| pfu_aug1.0_1211.1_43942.t1 | 2 | 2 | HAD | 474 | 507 | 2.8e-08 | 34.1 | 3.2e-05 | 0.094 | 12.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1211.1_43942.t1 | gi|224045713|ref|XP_002189831.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1211.1_43942.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1211.1_43942.t1 tttgatgaagatcagatagaggaatcactgagtatagagaacacattatggtctaacacagtggttgcatcagggtctgc cctgggggtggtggtgtatacgggcggggaaactcgctgtgtgatgaatacatctcaaccacagagtaaggttggattat tagatctggagattaacacactgaccaaggttttattttctgccgttgtcgtcctgtcaatcgtcatgatgatactgaag ggatttgacggaccatggtacagatatctgttcagattcatccttctattctcatacattatacccatcagtttgcgagt gaatcttgacatgggcaaggcagcatactcattcttcatacagcgtgacaaagctataccggacacgatagctcgtagta caaccataccggaagaactgggcagaatcagctatctactatctgataaaaccggcactctcacacagaatgaaatggtg ttcaaaaaacttcatttaggaacagtctcatactcatcagaaactatggacgaggtatcctcacacatcagaaccatgta cacacaactccaacaaaaagagacccagcagtcctcaatgcagcccaacctcggcccaacggccacaccctcccgaggga caggtccagtacgtaggacagtcattacccgagtgttcgaggcagtacgggctatagccctgtgtcacaacgtcacgccc gtgtatgaggacacagatggcgccaccagtgatgagacagaggccgaccaacaaagtcatcagacggtcgtataccaggc atcgagtcctgatgaggtagcattggtttcatggacggaagatgtaggtctgacgttagtaaaaagagatctgacacaca tgcagctacgtacaccgacgggaaatctggttggatatcatatactacaagtattcccatttacatcggagactaaaagg atgggcatcattgtcaaggatgaaagcactggagagataatattctacattaagggggctgatgttgtcatgcagacaat tgtacagtataacgactggctagaggaggaggtagagcattttcatattattgttggacctgtattggagggattgagga ctctggtagtggccaaaaaatttctttctgaagaacagtaccaagaatttgagtcccgataccatcaggctaagatgagt gtgcaggatcgtaacgctaaggtccaagctgtgatagagagcttagagagagacatggagcttctttgtctgacaggagt tgaggataaactacaagacggtgtcagacctacgctagaaatgctgaaaaatgctggcataaaggtttgtttgaagtact atgaacatgagtttgtagagttagcatgtcagtgtccgtgtgtggtcgtatgtcgatgctccccgactcaaaaagcggag attgtcaaactgctgagaatacacacaggaaaacgtacttgtgcaataggtgatggaggaaatgatgtcagtatgataca ggcagccaatgtaggtgtgggaatagtcggaaaggaggggaagcaggcatctttagcagctgatttctccatcacacagt tcagtcatataggacgattattaatggtacatggtagaaatagctataagcgatcagcatccttaagccagtttgtaatg cacagagggttgatcatttctaccatgcaggccgttttctgttctgtcttctattttgcttccgtagcattgtttccagg attcctcatgataggatattccacagtgtataccatgtatccagtattttcattggttcttgacaaggatgtatctgctg aggttgccatgacgtatccagaactttataaagaactagtcaagacagctctttaa |
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Protein
| Protein ID | pfu_aug1.0_1211.1_43942.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1211.1_43942.t1 FDEDQIEESLSIENTLWSNTVVASGSALGVVVYTGGETRCVMNTSQPQSKVGLLDLEINTLTKVLFSAVVVLSIVMMILK GFDGPWYRYLFRFILLFSYIIPISLRVNLDMGKAAYSFFIQRDKAIPDTIARSTTIPEELGRISYLLSDKTGTLTQNEMV FKKLHLGTVSYSSETMDEVSSHIRTMYTQLQQKETQQSSMQPNLGPTATPSRGTGPVRRTVITRVFEAVRAIALCHNVTP VYEDTDGATSDETEADQQSHQTVVYQASSPDEVALVSWTEDVGLTLVKRDLTHMQLRTPTGNLVGYHILQVFPFTSETKR MGIIVKDESTGEIIFYIKGADVVMQTIVQYNDWLEEEVEHFHIIVGPVLEGLRTLVVAKKFLSEEQYQEFESRYHQAKMS VQDRNAKVQAVIESLERDMELLCLTGVEDKLQDGVRPTLEMLKNAGIKVCLKYYEHEFVELACQCPCVVVCRCSPTQKAE IVKLLRIHTGKRTCAIGDGGNDVSMIQAANVGVGIVGKEGKQASLAADFSITQFSHIGRLLMVHGRNSYKRSASLSQFVM HRGLIISTMQAVFCSVFYFASVALFPGFLMIGYSTVYTMYPVFSLVLDKDVSAEVAMTYPELYKELVKTAL |
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