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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_121198.1_13762
Locus scaffold121198.1 : 1 ... 1171 : -
To GenomeBrowser scaffold121198.1:1..1171
Genes list of scaffold scaffold121198.1
Synonym pfu_aug2.0_887.1_24491

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_121198.1_13762.t1 1 1 DUF4518 7 99 6.4e-28 97.5 4.7e-32 7.0e-28 97.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_121198.1_13762.t1 gi|291227785|ref|XP_002733864.1| PREDICTED: uncharacterized protein C3orf38 homolog [Saccoglossus kowalevskii] 6.0e-17

Transcript
Transcript IDpfu_aug1.0_121198.1_13762.t1
Definition-
>pfu_aug1.0_121198.1_13762.t1
gtgtatttttccagagcgcgcatgcgtcgaggaccaggcagctggcgccatagcagtagcgaaaaaactttcgttttacg
taaaagatcaacaattattgttcaatccaaacatatcttcggatggaataaaggtaaaatctgatgtcaacggcctcctg
atggtattcgtgagtgggaccgttcatcgtcacgatgattgtgttggtgtttttgatcaaacgtttggactgatgaaagt
accgagcatgatgtacgacgaatggaaaattaaactcgtgcatctgaaaatagatgtatctaatccatatcccaagctcg
aggcgacaggcacgagttccagcaaagtgttagatctagatcttaaagaatgctgtaagaatgatctgtga

Protein
Protein IDpfu_aug1.0_121198.1_13762.t1
Definition-
>pfu_aug1.0_121198.1_13762.t1
CIFPERACVEDQAAGAIAVAKKLSFYVKDQQLLFNPNISSDGIKVKSDVNGLLMVFVSGTVHRHDDCVGVFDQTFGLMKV
PSMMYDEWKIKLVHLKIDVSNPYPKLEATGTSSSKVLDLDLKECCKNDL

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