Gene
| Gene Model ID | pfu_aug1.0_1212.1_29616 |
|---|---|
| Locus | scaffold1212.1 : 1166 ... 34295 : + |
| To GenomeBrowser | scaffold1212.1:1166..34295 |
| Genes list of scaffold | scaffold1212.1 |
| Synonym | pfu_aug2.0_505.1_17496 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1212.1_29616.t1 | 3 | 1 | Macro | 77 | 192 | 6.6e-24 | 84.0 | 1.3e-25 | 4.8e-22 | 78.0 |
| pfu_aug1.0_1212.1_29616.t1 | 3 | 2 | Macro | 250 | 314 | 6.6e-24 | 84.0 | 0.0016 | 6.1 | 6.7 |
| pfu_aug1.0_1212.1_29616.t1 | 3 | 3 | Macro | 424 | 424 | 6.6e-24 | 84.0 | 0.62 | 2300.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1212.1_29616.t1 | gi|260828141|ref|XP_002609022.1| | hypothetical protein BRAFLDRAFT_84838 [Branchiostoma floridae] | 9.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_1212.1_29616.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1212.1_29616.t1 atggtttcccatatccacaaggatttgggcagtttggaccaggatacccaggtcctaaccaaggacaaccaggatttcct ggtcaaagactaccaagtccaggccatgaacatccaggtcaagggcaaggttatccaggtcaaggtcaagcatatccagg tcaagggtatccaggtcaaggacaaggatatccagaattgtgatgataattttcaggtggatgtaatagtgaacacagca tctaaggacctgaatctaagtcagggctttgtatctaactccctactaaaagcaggaggagagaccctgcaagaagaatg taccaaaaattatcccaacggcatcgagttcggagatgtggcagtgacatctggtggcaaactgaagtgtaaaaatgtgt tacatggtgccttaccagcttggagtcaggatcaaagtgtgcaatccctggaggtactgcagactttcttgaataattgc ctcaaagaagcttcctctaagaaagctaaatccatagccatgccagcaatgggaacaggaaagctgggttaccagaaaga tgtggttgccaagagcatgtttgacgcagcagcaggcgtgtctagtcataagtcttcaatcaaagaagtcagatttgtca tctacgagaaagatacagaaactcttcagagggtctccgtacccatgggctctataaacatgaacatctatcaaggggac ctaactgtagcagacgttgatgttatagtcaacagcacgaacagtgaaatagatttaagtaaaggtgtaggaggtgtccc tgttgcagagatagccaaacatatgtatgaagcaatagaaaagttccagaaagaaacaccacctcaacatttaaaagaag tacacattgttatcttccaacaacaaatggtacaaagctttataatagccatgcaggggtgcttccagggtgccaaacct aaaggaattctaggaaaagcctggaattatcttaaatcaggtggaggaggagagactgaagatccaaaatggcaggccaa ggtatcgaagcagcctcccagtacttcatgtgttacactggtggtgtttggggacaatggccaggatatagacaaagcca tcagtcacctggaaaaaatcattgaagaggattataatacaaaattgtttaaggagagaatcatttctcaactcagtcaa aatcagataaagcagatcaagcatctggagactaaacatgatgtagaagtgactgttgacaaagacaataattctataat attaaacggcacaaatgagaaccttatgggtgctgcagatgctattcatactatcattagagaagctgagagaaacaaac aagcaaaacaacaagccgaactggtatcagaaatggttcaatggtgctttcttgaaactggtaccgatcaaacgactatg gaagagtatccagcaagtgttaattttctcattgaaacagcatttcgcaacaaagatcctgtggttaaatttaaggacaa ttctgggaatgaatacacaataagctttcaaaatatggaggagtacccaactagtacaccagatgataaggtcaaagtgt tgagaagagaaaagcttaaagtgattttacttttaaaagccaatattgagcaaaatcaaagtgctgcatgcaccaaactt gcatattggatgtacatgtatctttggtaa |
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Protein
| Protein ID | pfu_aug1.0_1212.1_29616.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1212.1_29616.t1 MVSHIHKDLGSLDQDTQVLTKDNQDFLVKDYQVQAMNIQVKGKVIQVKVKHIQVKGIQVKDKDIQNCDDNFQVDVIVNTA SKDLNLSQGFVSNSLLKAGGETLQEECTKNYPNGIEFGDVAVTSGGKLKCKNVLHGALPAWSQDQSVQSLEVLQTFLNNC LKEASSKKAKSIAMPAMGTGKLGYQKDVVAKSMFDAAAGVSSHKSSIKEVRFVIYEKDTETLQRVSVPMGSINMNIYQGD LTVADVDVIVNSTNSEIDLSKGVGGVPVAEIAKHMYEAIEKFQKETPPQHLKEVHIVIFQQQMVQSFIIAMQGCFQGAKP KGILGKAWNYLKSGGGGETEDPKWQAKVSKQPPSTSCVTLVVFGDNGQDIDKAISHLEKIIEEDYNTKLFKERIISQLSQ NQIKQIKHLETKHDVEVTVDKDNNSIILNGTNENLMGAADAIHTIIREAERNKQAKQQAELVSEMVQWCFLETGTDQTTM EEYPASVNFLIETAFRNKDPVVKFKDNSGNEYTISFQNMEEYPTSTPDDKVKVLRREKLKVILLLKANIEQNQSAACTKL AYWMYMYLW |
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