Gene
| Gene Model ID | pfu_aug1.0_12127.1_32163 |
|---|---|
| Locus | scaffold12127.1 : 17706 ... 23780 : + |
| To GenomeBrowser | scaffold12127.1:17706..23780 |
| Genes list of scaffold | scaffold12127.1 |
| Synonym | pfu_aug2.0_8202.1_09656 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12127.1_32163.t1 | 2 | 1 | DUF4515 | 23 | 34 | 5.7e-33 | 114.3 | 0.22 | 1100.0 | -1.0 |
| pfu_aug1.0_12127.1_32163.t1 | 2 | 2 | DUF4515 | 48 | 241 | 5.7e-33 | 114.3 | 1.1e-36 | 5.7e-33 | 114.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12127.1_32163.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12127.1_32163.t1 atgttaatacccaagccgcacaatagcaaatatcccttactagaaaaagttactggtgacctagaatctacaaaaaagag agtagaggaattacgtaaagaaaatgaatggttacaacaagagggcagccgtgtaagagtggaaagccacgagtatatga gttacatggataagaagacaacagccagacagaccaaggtgataacactgagtgaccacaataaacaggaaatacaggat attaaacgacaggaggaactacttaaagaggagtttaatcagaaaaaacaagcattacaaaaccttctgtttgaaaaaca gaatattttgaaaaagactacagaggaactggcagagttaaatacttataaggaactacaaacagaacagctgaataaga ttaaagagttagagaaggaggttatgaccatgagatccaaacactcggagacaatccagagtcttaaatccacatttctt aaggagaagagggaatatcaacaggattcagacagccgtatagctgctctagagaaattggctaacaaggaggctgaaaa atgtttgacagatcacacaaacaaaatcaaattagacaacagaaagcttcgacgagaacttcaggagttgattcacatga cacgtgtatatcaggctcaccagcgagatctcgaggagcaacgtaagcagctactaagagaacaacagtatgctgaggat ctgaaaaaactgagaagtacgcgacaacataaagtactgaaagcttttgacttgttgggtgaagaagctgacgttgaagg tgaaacagcttctttctcatag |
|
Protein
| Protein ID | pfu_aug1.0_12127.1_32163.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12127.1_32163.t1 MLIPKPHNSKYPLLEKVTGDLESTKKRVEELRKENEWLQQEGSRVRVESHEYMSYMDKKTTARQTKVITLSDHNKQEIQD IKRQEELLKEEFNQKKQALQNLLFEKQNILKKTTEELAELNTYKELQTEQLNKIKELEKEVMTMRSKHSETIQSLKSTFL KEKREYQQDSDSRIAALEKLANKEAEKCLTDHTNKIKLDNRKLRRELQELIHMTRVYQAHQRDLEEQRKQLLREQQYAED LKKLRSTRQHKVLKAFDLLGEEADVEGETASFS |
|