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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12130.1_68450
Locus scaffold12130.1 : 1865 ... 10015 : -
To GenomeBrowser scaffold12130.1:1865..10015
Genes list of scaffold scaffold12130.1
Synonym pfu_aug2.0_277.1_23790

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_12130.1_68450.t1 gi|241592436|ref|XP_002403974.1| transcriptional repressor protein yy, putative [Ixodes scapularis] 1.99993e-41

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
egg-4cell 1
8-16cell 2
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 2

Transcript
Transcript IDpfu_aug1.0_12130.1_68450.t1
Definition-
>pfu_aug1.0_12130.1_68450.t1
atgccgatagagacagttgagacaacagatgaaactgtggaggttcaacctatgatagcattacaaccgcttccagacgc
acaggaagaaattgttttacaaacaagggaagaagtggttggtgatccgaacctcgtgtatgcggacactattccagttc
ctgcacctgaaatagaaatatgcacagaagaaacgccgacttttaacaaaaagaagggtggtaagaagaaaactgcacgg
tcgcgagggcttctcggggctggaactttgggagctgaatattcttttgatacaccgacgtcgacgaagaaatgggaaca
aaaacaagttcagatcaaaactttagaaggagaattctctgtgacaatgtgggcgacaggaggagatgacaaaactaaat
tagaggaagatgcgtcagtttcagagacagatgctgatttcacagaatacatgacggggaaaaaacttcccccaggggga
attcctggccttgaccttagtgatcccaaacagttagcagaatttgctagtctccagcctcgcgatgttcagctgctgca
gcactcaagtttgaacttatga

Protein
Protein IDpfu_aug1.0_12130.1_68450.t1
Definition-
>pfu_aug1.0_12130.1_68450.t1
MPIETVETTDETVEVQPMIALQPLPDAQEEIVLQTREEVVGDPNLVYADTIPVPAPEIEICTEETPTFNKKKGGKKKTAR
SRGLLGAGTLGAEYSFDTPTSTKKWEQKQVQIKTLEGEFSVTMWATGGDDKTKLEEDASVSETDADFTEYMTGKKLPPGG
IPGLDLSDPKQLAEFASLQPRDVQLLQHSSLNL

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