Gene
| Gene Model ID | pfu_aug1.0_12130.1_68451 |
|---|---|
| Locus | scaffold12130.1 : 10146 ... 15079 : + |
| To GenomeBrowser | scaffold12130.1:10146..15079 |
| Genes list of scaffold | scaffold12130.1 |
| Synonym | pfu_aug2.0_277.1_23789 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12130.1_68451.t1 | 1 | 1 | Lipid_DES | 5 | 42 | 4.3e-22 | 77.0 | 9.1e-26 | 6.7e-22 | 76.4 |
| pfu_aug1.0_12130.1_68451.t1 | 1 | 1 | FA_desaturase | 65 | 275 | 7.0e-24 | 84.6 | 9.5e-28 | 7.0e-24 | 84.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_12130.1_68451.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12130.1_68451.t1 atgggagctacagtttcccgttcagattatgaatgggtatatacagaggaaccacatgcatcaagaagaaaagaaattct tgcgaagtatccacagatcaagcagttgatgggaagtgacccttctctcaagtataaagtgtgtgtgttggtgttcctcc agttcttgggggtttatctagtccatgaccagccttggtgggtcgtcttcataatgtcatatatctatggtggcaccatc aaccactctctcactctcgcaatacacgaaatagcgcataatctagcatttggacatggccgtccgctagcaaacagagc tctcggaatgttcgcgaatttacctataggactacctatgtctgtgtctttcaaaaagtaccatctcgaacaccaccgtt accaaggcgacgagaaaaaagacgtggatataccttgcaaattcgaaggaaatttcttcaataacactttcctgaagttg atatgggtggttttacagccatatttctatacattcaggccactttttatacgaccgatgccagtatctcatctagaagt tatcaatttcatagtacagttttcatttgacgctttattgtacaagtatctaggattaaaagcagtattctattttatac aaggtaccttccttggtacaggcctacatcccctttctggacacttcatttccgagcactatatgttcatcaaaggccaa gaaacctactcgtattatggaccactgaatctcctaaccttcaatgttggttatcataatgaacaccacgactttcctag catccctggaaccaggttaccacag |
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Protein
| Protein ID | pfu_aug1.0_12130.1_68451.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12130.1_68451.t1 MGATVSRSDYEWVYTEEPHASRRKEILAKYPQIKQLMGSDPSLKYKVCVLVFLQFLGVYLVHDQPWWVVFIMSYIYGGTI NHSLTLAIHEIAHNLAFGHGRPLANRALGMFANLPIGLPMSVSFKKYHLEHHRYQGDEKKDVDIPCKFEGNFFNNTFLKL IWVVLQPYFYTFRPLFIRPMPVSHLEVINFIVQFSFDALLYKYLGLKAVFYFIQGTFLGTGLHPLSGHFISEHYMFIKGQ ETYSYYGPLNLLTFNVGYHNEHHDFPSIPGTRLPQ |
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