Gene
| Gene Model ID | pfu_aug1.0_1216.1_00653 |
|---|---|
| Locus | scaffold1216.1 : 25336 ... 35885 : + |
| To GenomeBrowser | scaffold1216.1:25336..35885 |
| Genes list of scaffold | scaffold1216.1 |
| Synonym | pfu_aug2.0_3664.1_15833 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1216.1_00653.t1 | 1 | 1 | Fibrinogen_C | 18 | 178 | 0.0 | 157.2 | 0.0 | 0.0 | 156.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1216.1_00653.t1 | gi|260830597|ref|XP_002610247.1| | hypothetical protein BRAFLDRAFT_126820 [Branchiostoma floridae] | 4.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_1216.1_00653.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1216.1_00653.t1 atgaaagactgtcacattacattcgatgactgcacggtaatcaaatacttttataagaacagtaagtcaggagtatatac tatccatccaaagggagggaagccacagatggtgtactgtgacatgatgaccgatggtggtggatggacagtgttccaaa gacgatacgatggtagtgttgacttcgtgaatagaaagtgggaagctttcaagaatggattcggaaaggtttctggtgaa cattggttagggaatgaacttatccacatgatctcatcgcaaggtgtatatgaactgagatttgaactaggagattttga gtccaactatcgacatgcagtgtacacgaacttcaagctccagtctgaacaccatggataccgattaacatacgataaat tcgattatggaaatgcaggtgactccctaaaaatggcacgaaacatgaagtttacgacaaaggataaagatcaagataca aacagtcgtaactgtgcaacctatgatgaccatccaggagcatggtggcatgcaagtaaggcagatttatgttccccttc gaaggaggggggacatattgctttgccgttgtcggtcggtccgtccgtcggtccgtcctaccgtccgaccgtcggtctgt cggttcgtattccacaacagtttaggctcattatctctggaatggattga |
|
Protein
| Protein ID | pfu_aug1.0_1216.1_00653.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1216.1_00653.t1 MKDCHITFDDCTVIKYFYKNSKSGVYTIHPKGGKPQMVYCDMMTDGGGWTVFQRRYDGSVDFVNRKWEAFKNGFGKVSGE HWLGNELIHMISSQGVYELRFELGDFESNYRHAVYTNFKLQSEHHGYRLTYDKFDYGNAGDSLKMARNMKFTTKDKDQDT NSRNCATYDDHPGAWWHASKADLCSPSKEGGHIALPLSVGPSVGPSYRPTVGLSVRIPQQFRLIISGMD |
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