Gene
| Gene Model ID | pfu_aug1.0_12163.1_68457 |
|---|---|
| Locus | scaffold12163.1 : 14756 ... 26099 : + |
| To GenomeBrowser | scaffold12163.1:14756..26099 |
| Genes list of scaffold | scaffold12163.1 |
| Synonym | pfu_aug2.0_1.1_03316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12163.1_68457.t1 | 2 | 1 | LIM_bind | 30 | 42 | 4.0e-25 | 88.3 | 0.027 | 200.0 | 0.9 |
| pfu_aug1.0_12163.1_68457.t1 | 2 | 2 | LIM_bind | 41 | 140 | 4.0e-25 | 88.3 | 2.9e-28 | 2.2e-24 | 85.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12163.1_68457.t1 | gi|157128172|ref|XP_001661340.1| | AAEL011058-PA, partial [Aedes aegypti] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12163.1_68457.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12163.1_68457.t1 atgccttctgggcagcctatgtccagtccaatggtggacagggatcacggcatagcgagacacaccccctatatgggtca gcctgactacaggattcatgaactcaacaagcggctacagcagagaagtgaggtagtaacagaagggcgtttgatcttag aatttacgtttgatgacctgatgaggatcagatcgtggcatttccaagtacggcagcaccgagagctcataccacgcagt gttattgccatgcagcaagatccctctatgatggaacagttatcaaagaacattactcgccaaggcctcacaaactacac tctcaactttctcaggctttgtgtaatcctagagcccatgcaggagctgatgtcacgacacaaggcgtacggacttaacc ctcgggattgtctgaaaacgacattgttccagaagtggcaaagaatggtggctccacctggaaaggggaaaccagaaaca gtgagacagcagggtaagagaagaaagaggaagtcctcagcgggcaatgctggtaatatggctgtaggtgctcctgctgg gaaaaagagatctcctgggccacagggaatgcccacctcagtaccaggggtaagacgttatgtttgtttagtttaa |
|
Protein
| Protein ID | pfu_aug1.0_12163.1_68457.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12163.1_68457.t1 MPSGQPMSSPMVDRDHGIARHTPYMGQPDYRIHELNKRLQQRSEVVTEGRLILEFTFDDLMRIRSWHFQVRQHRELIPRS VIAMQQDPSMMEQLSKNITRQGLTNYTLNFLRLCVILEPMQELMSRHKAYGLNPRDCLKTTLFQKWQRMVAPPGKGKPET VRQQGKRRKRKSSAGNAGNMAVGAPAGKKRSPGPQGMPTSVPGVRRYVCLV |
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