Gene
| Gene Model ID | pfu_aug1.0_12166.1_61006 |
|---|---|
| Locus | scaffold12166.1 : 1 ... 17683 : + |
| To GenomeBrowser | scaffold12166.1:1..17683 |
| Genes list of scaffold | scaffold12166.1 |
| Synonym | pfu_aug2.0_204.1_13790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12166.1_61006.t1 | 2 | 1 | Med15 | 3 | 32 | 0.0 | 163.7 | 1.0 | 15000.0 | -8.0 |
| pfu_aug1.0_12166.1_61006.t1 | 2 | 2 | Med15 | 45 | 188 | 0.0 | 163.7 | 0.0 | 0.0 | 163.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12166.1_61006.t1 | gi|241684480|ref|XP_002401270.1| | positive cofactor 2, subunit of a RNA polymerase II multiprotein coactivator, putative [Ixodes scapularis] | 1.0e-34 |
Transcript
| Transcript ID | pfu_aug1.0_12166.1_61006.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12166.1_61006.t1 gtatgatgacacagcagcaacagcaacaacttctgctacgtcagcaacaactccagcaacaaagacatcaacaacaactt gcacagatgcaggcaagcaataggcctccattacagtcgtcagtgtctaaagcccctacccccacagtatctacacacat gtgtcagcctttgattgacgctgtagcagctcacatgcagagtcccatgtttaatcactgtctacagcaaacatttggtc ccgctgtcactgcgctgtacggatcacccatacggtatggcaatgtattcagagctccaagtcctccaccaaagaggaag tatgaggagttagaagaggaggaagaggatgagattcctcacatcctacagggggagatagctcgccttggtaacaggtt caaggtcactttggatcctacacaacattccttgtctaacgcaatacatctgttgtgcagaatagatgacaagtgtctac caagtgttccgcctatatcagtgactgtaccagagttataccctgaagtcagcccagagtgtaatactgatgctgatgaa tacggagatgagcatacgtcgagcgtgtgtagcagctactccctcataacccaccaggtgtattatgactacagtgtgat ggaatga |
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Protein
| Protein ID | pfu_aug1.0_12166.1_61006.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12166.1_61006.t1 MMTQQQQQQLLLRQQQLQQQRHQQQLAQMQASNRPPLQSSVSKAPTPTVSTHMCQPLIDAVAAHMQSPMFNHCLQQTFGP AVTALYGSPIRYGNVFRAPSPPPKRKYEELEEEEEDEIPHILQGEIARLGNRFKVTLDPTQHSLSNAIHLLCRIDDKCLP SVPPISVTVPELYPEVSPECNTDADEYGDEHTSSVCSSYSLITHQVYYDYSVME |
|