Gene
| Gene Model ID | pfu_aug1.0_12168.1_61010 |
|---|---|
| Locus | scaffold12168.1 : 7696 ... 20724 : + |
| To GenomeBrowser | scaffold12168.1:7696..20724 |
| Genes list of scaffold | scaffold12168.1 |
| Synonym | pfu_aug2.0_2510.1_02159 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12168.1_61010.t1 | gi|260827092|ref|XP_002608499.1| | hypothetical protein BRAFLDRAFT_126632 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12168.1_61010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12168.1_61010.t1 atggcgatatggctgaagtttgacccattaggacatttcctctacacgggcattgctaacgatactacagtaaggccggc cagttcttcccgagtctccttcattaatgctagttcagagagggttgtaccacgatcccccatacacgaggaaggactga atctggcacgacagtacgcatctcatataacggagacagccaatcagagtcagccatctgtagtgaccactagtaatgaa gaggccagaatagagagagtggacactcaagctggggcttccaatgccccacatccacttcacacagacactaataatat gggagattttcaacgtccatataactggagccctccaccacgaggggcatcggctgagacagacagtgatgtcattgtgg aggatgaaatctcactaacaccatcaaactttcctctgctgcagacaaacagaagccgactcagagagtccagacgcacg gcaagtctggcatcaagtagggctaatagctctcccccagagggtagactctcaagctgtagctctaacagtggatcaga cagtactgatagaaatagcaatctctcacgtcagtcaatatctccgtttgtggcaatatctgaggcacctagagttatta ttattcctgattctcagtcagattcgagtaggagtactgcatcgtcccttaactccggtacatctcatagtaggacagga ttgtttagtttccctcagtctctgagtagaccagaaagtagccgtcccacaactcaattaacgggacttttcagtttgag taacagaacagtaagtgcaccgtccagttctgtagcctcatctgtagtgaattcatcgttagcgagaaacagcgagcaga ttccaagtcacaactctgcaactgacggttctcatgactcttcctctctgacttcctcatcagaatgtgatgaaaattgt caggtatgtagaagatatgacccagaaaggttagctagactgacacagaacagttccagtaataactttacaaggctccg cagacatcaccggcatttacacggcccccatgaaagaagtgcttttacctcaccaagtggtgcaagaaatttatactcca tgaacattcctatgaattcgtcttatcccattgggcgagagccctatctacaaagagacgtcaattcaagacggcagaat ttgttgacagaatcattggagaatcctcacactgacagtcagagggttcagtcccttttaaatctcagttctagtcagtt atcgcagattcacagggagagattagatgaaaactttggtattggagcctcttcagatacacataatggaagcagtactt acatggtgcaagacgctaatctaacaaacgcctcggataacattcatacgtatgattcaaatatacatgaaaactttgca acgattacggcaagaattgagagagaaatgaatgaactagatagaaggatcagtgcactacggaacacgttcaacgaaag tgttagacgatttcagcagagacgatccgggttgctacagcaaccagataatacgagtagtgatttgtctttaccttcta gtcaggcatttaatcctccactgatcagaataacacgatgtggtgaaacgtctcagccctcccagaatggagcttcggcc aatcccagaagtgatgatgtacaacgtcctcatgaagcaaacaacggcatgctggagaatgcgttacgtacacgtccgtt catcagaccttctgatatatcacatactgaatcatccaatgatgaaccggctacaagctggcattccttagagagacatc atcttcatcctcattactctgtcagtatacttgacaacacaattaatcgacctaatgaccccatacagatggccatcaac agagcaatagctgatgtgtttatgggtcgtggtgaacctgcggtggcggcaaatatcatcaatcaaacacatagaataca agcctgggactttaccaagtgtgatatacctgatataacagatgccaaagtgaatgtgatagtacagcactgtaagctac ataatgaagccagctgtgatatttcccaggatggtactatgttaaccacatttgttcccagtcatagaggattccctgat gataatatacttgcggtttattctctgctaccaaaaacaaggggccagtgcctctttaccaaaagttttggtcccaatgc catctcagtgagtctgtctcctatgaacaactatgttatggtgggtctggcagccaagagactgtcctgggtattcacac ctaatcagcttgttgctaggatcttgaagttggagaacaaggaagctggggaaaattcaatgcaggtggttacagatgtg atgcatccatgtgacacagacattcgcacacacgttagcgttaatgcagcaagatggctgcctagtccaggggagggaat cgtgtacggcactaacagaggagaccttcatatctgtcggcctggggccaaaataacaacaaagggtgattggtcggcag aattagcccatgctgagtcaatacgacgtcatttattcagcatgatgagatctaacgccccaggaggaccagggattccc ccgttagctaacactgccactcagacactgagggtacggagaagtgccggtacacagacagacacagatagtcctgaata tgagtataggtcttctatagtttaa |
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Protein
| Protein ID | pfu_aug1.0_12168.1_61010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12168.1_61010.t1 MAIWLKFDPLGHFLYTGIANDTTVRPASSSRVSFINASSERVVPRSPIHEEGLNLARQYASHITETANQSQPSVVTTSNE EARIERVDTQAGASNAPHPLHTDTNNMGDFQRPYNWSPPPRGASAETDSDVIVEDEISLTPSNFPLLQTNRSRLRESRRT ASLASSRANSSPPEGRLSSCSSNSGSDSTDRNSNLSRQSISPFVAISEAPRVIIIPDSQSDSSRSTASSLNSGTSHSRTG LFSFPQSLSRPESSRPTTQLTGLFSLSNRTVSAPSSSVASSVVNSSLARNSEQIPSHNSATDGSHDSSSLTSSSECDENC QVCRRYDPERLARLTQNSSSNNFTRLRRHHRHLHGPHERSAFTSPSGARNLYSMNIPMNSSYPIGREPYLQRDVNSRRQN LLTESLENPHTDSQRVQSLLNLSSSQLSQIHRERLDENFGIGASSDTHNGSSTYMVQDANLTNASDNIHTYDSNIHENFA TITARIEREMNELDRRISALRNTFNESVRRFQQRRSGLLQQPDNTSSDLSLPSSQAFNPPLIRITRCGETSQPSQNGASA NPRSDDVQRPHEANNGMLENALRTRPFIRPSDISHTESSNDEPATSWHSLERHHLHPHYSVSILDNTINRPNDPIQMAIN RAIADVFMGRGEPAVAANIINQTHRIQAWDFTKCDIPDITDAKVNVIVQHCKLHNEASCDISQDGTMLTTFVPSHRGFPD DNILAVYSLLPKTRGQCLFTKSFGPNAISVSLSPMNNYVMVGLAAKRLSWVFTPNQLVARILKLENKEAGENSMQVVTDV MHPCDTDIRTHVSVNAARWLPSPGEGIVYGTNRGDLHICRPGAKITTKGDWSAELAHAESIRRHLFSMMRSNAPGGPGIP PLANTATQTLRVRRSAGTQTDTDSPEYEYRSSIV |
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