Gene
| Gene Model ID | pfu_aug1.0_12187.1_68460 |
|---|---|
| Locus | scaffold12187.1 : 1 ... 3775 : - |
| To GenomeBrowser | scaffold12187.1:1..3775 |
| Genes list of scaffold | scaffold12187.1 |
| Synonym | pfu_aug2.0_129.1_30259 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12187.1_68460.t1 | 1 | 1 | tRNA-synt_2b | 44 | 256 | 0.0 | 173.3 | 0.0 | 0.0 | 173.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12187.1_68460.t1 | gi|307213760|gb|EFN89098.1| | Glycyl-tRNA synthetase [Harpegnathos saltator] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12187.1_68460.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12187.1_68460.t1 atgcattggttgcagcatctgacctactattttcacttgagtgattttgctttaaaagccaaaattgagcaaagtcattt tgaaaaattattaaaagacaaaaaagttacggatgaagtgaaagaggaaatccgtagtcttcttccaaaggtggatggta tgagcagggatgacatgcaggccgtactacgaaaatttgatatgaaatcaccgattacaaacaatgatctaacagatcct atagactttaaccttatgttcggtatctccatcggtccaactggttatatgaaaggctttctgaggcccgagacagctca aggtatctttgtgaattttaaacggcttttggagtttaaccagggcaagttaccatttgccgcagcacaaattggtaatg ctttcaggaatgagatttctcctagatctggcttactcagggtcagagagttcacaatggcagaaatagagcatttttgt gacccagatgagaagaatcatcataaattttctgacgtagcagatttagaattagtgctatactcagcgtgtaaccagat ggatggcaaagcaccacagagagttactgtcggcaaagctgttagtgagaggctaatagccaatgagacgctaggttact tcatggctcgaatttacttgttcatgctgaaagttggcattgatccaaagaagttgaggttccgacaacacatgtcgaac gagatggctcattacgcgtgtgactgctgggatgctgagtgtaaaacatcatac |
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Protein
| Protein ID | pfu_aug1.0_12187.1_68460.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12187.1_68460.t1 MHWLQHLTYYFHLSDFALKAKIEQSHFEKLLKDKKVTDEVKEEIRSLLPKVDGMSRDDMQAVLRKFDMKSPITNNDLTDP IDFNLMFGISIGPTGYMKGFLRPETAQGIFVNFKRLLEFNQGKLPFAAAQIGNAFRNEISPRSGLLRVREFTMAEIEHFC DPDEKNHHKFSDVADLELVLYSACNQMDGKAPQRVTVGKAVSERLIANETLGYFMARIYLFMLKVGIDPKKLRFRQHMSN EMAHYACDCWDAECKTSY |
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