Gene
| Gene Model ID | pfu_aug1.0_1219.1_22496 |
|---|---|
| Locus | scaffold1219.1 : 24750 ... 31125 : - |
| To GenomeBrowser | scaffold1219.1:24750..31125 |
| Genes list of scaffold | scaffold1219.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1219.1_22496.t1 | 2 | 1 | fn3 | 11 | 84 | 2.8e-13 | 49.8 | 2.8e-09 | 2.0e-05 | 24.5 |
| pfu_aug1.0_1219.1_22496.t1 | 2 | 2 | fn3 | 116 | 187 | 2.8e-13 | 49.8 | 2.7e-10 | 2.0e-06 | 27.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1219.1_22496.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1219.1_22496.t1 atgacgtgtacatttaatgagttaaaggtgacagccttcaccttgacagccaccacagatactataacagtaacatggac accacccacgtcacatacctacgtcagtcgttatgatgtcagatcgaggataactggtacaggaagtgcttacagcactg catcagcagggactgctaacaaactcactataaaccaaggtctgatggcaggacaggcttatgatgtctttattgaatct gtggataattatactcaggttgtgcaacaaaaggttgcatctgatacaaaagttgttagactgaagccaggtcctccatt ggatgtaaaatgtccaatgagccctaaagacagatctttagagataacatgggatgctcctgctaatcctaatggtatca tacagtactataaagtatatgtgtactacgccattggatctacaaaggaagtaaaccagacaataggaacagttactacc tttaatgtacagaaccttacaccagaattgctactttcagagtcgacttttggttttgctgtcagtgctgtgaatgatgg tgatgaaagcattagaactagtgatatgacgactcgtaaatattgtacaacaaaagcaccatgagcagaagacaccacag aaatgtgttcaaaagattctatttag |
|
Protein
| Protein ID | pfu_aug1.0_1219.1_22496.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1219.1_22496.t1 MTCTFNELKVTAFTLTATTDTITVTWTPPTSHTYVSRYDVRSRITGTGSAYSTASAGTANKLTINQGLMAGQAYDVFIES VDNYTQVVQQKVASDTKVVRLKPGPPLDVKCPMSPKDRSLEITWDAPANPNGIIQYYKVYVYYAIGSTKEVNQTIGTVTT FNVQNLTPELLLSESTFGFAVSAVNDGDESIRTSDMTTRKYCTTKAPXAEDTTEMCSKDSI |
|