Gene
| Gene Model ID | pfu_aug1.0_1222.1_43943 |
|---|---|
| Locus | scaffold1222.1 : 386 ... 10560 : + |
| To GenomeBrowser | scaffold1222.1:386..10560 |
| Genes list of scaffold | scaffold1222.1 |
| Synonym | pfu_aug2.0_1051.1_04789 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1222.1_43943.t1 | 1 | 1 | TRAM_LAG1_CLN8 | 29 | 201 | 8.4e-18 | 64.6 | 7.8e-22 | 1.2e-17 | 64.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1222.1_43943.t1 | gi|346466959|gb|AEO33324.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1222.1_43943.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1222.1_43943.t1 atgggtatgcggagaacgagaagcaccaagaacccaccaatcttcagtcatgaatttgtcattcaaaaccacgcagacat tgtgtcgtgtgtggcgatggtgtttgtcattggactgatgtttcaggaaaatttcctgagtataaatcagctttgggaag gatacccccacaatgagttatcgtttatgatgaagttttactttatagtacaaatagcatactggctccactgtttcccc gagctttatttccagaaaacgaaaaaggatgacatgctgtccagaattcagtatgcagttctttacttggtctttataac agcagcatatgcattaaacttttcccgcgttgccctcgtcatgattgtattacattactctgtggagtttgtcttccatt tagcaagactactgtactttgcagagaaaactgatctagctaacacagggtttatggtattcaatgggctatttgtccta gtgaggttgggaaccatcaccctctctgtgctcacattttggtatggactggagcagagtaaccagcctagtgtagatag ggaagctggaaactttaacacgcaaatgatcaggtttgttatttatacaatgtacaagtttgatacaatacaatgcacaa tgtatgtagattttttaaaaaagcatgaacatgtttctgtctctcagacttggctaatcgtaaaattttctgaaattgga gatgataatcatttgtatacattttattag |
|
Protein
| Protein ID | pfu_aug1.0_1222.1_43943.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1222.1_43943.t1 MGMRRTRSTKNPPIFSHEFVIQNHADIVSCVAMVFVIGLMFQENFLSINQLWEGYPHNELSFMMKFYFIVQIAYWLHCFP ELYFQKTKKDDMLSRIQYAVLYLVFITAAYALNFSRVALVMIVLHYSVEFVFHLARLLYFAEKTDLANTGFMVFNGLFVL VRLGTITLSVLTFWYGLEQSNQPSVDREAGNFNTQMIRFVIYTMYKFDTIQCTMYVDFLKKHEHVSVSQTWLIVKFSEIG DDNHLYTFY |
|