Gene
| Gene Model ID | pfu_aug1.0_1222.1_43944 |
|---|---|
| Locus | scaffold1222.1 : 10911 ... 28015 : - |
| To GenomeBrowser | scaffold1222.1:10911..28015 |
| Genes list of scaffold | scaffold1222.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1222.1_43944.t1 | 1 | 1 | Pep_M12B_propep | 22 | 87 | 4.8e-14 | 52.2 | 3.2e-17 | 1.6e-13 | 50.5 |
| pfu_aug1.0_1222.1_43944.t1 | 2 | 1 | ADAM_spacer1 | 145 | 172 | 2.6e-09 | 36.9 | 0.38 | 1900.0 | -1.3 |
| pfu_aug1.0_1222.1_43944.t1 | 2 | 2 | ADAM_spacer1 | 223 | 313 | 2.6e-09 | 36.9 | 2.2e-12 | 1.1e-08 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1222.1_43944.t1 | gi|301627601|ref|XP_002942962.1| | 4.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1222.1_43944.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1222.1_43944.t1 atggacgatataaaagtctatattgataccaaactcggaagaaaattagcagaattggaggaccatcattgtgtagtcgt gaacaaatacgataatggcacagaaagtaaacattcttgtgattctatgggattatgccatcaccatggttacataaaag gcaagaactattcttcagtagccgtcagcacgtgcgatggcttgcatggtgtactgtcaacaggagaccatgatttgtac atacagcccgtcaaagatcaccatgtacaatttacaactccttatctcaactcctccgactcctcaaaatcgccccatac cagtgcgcccaacaccagcaggcctcagcaatcaaacactgctcatctcatataccgacgacaagcaaagaaacaattct gcgctcatacaggagaacacgatgcagacaaatggagattagacagctcagatgatgaacacctaagacagagacggtca accaaacaacacctaaaaatgaaggttgtcgtggccccggacacgtataaataccatggtggtgacacagaacgctttat tactacagttatgaatatgtcatttgggtgtgacggccatttaggctcacaggtacgatttgataactgtggagaatgtg ggggaacaggaaggggatgtaatcagcattctggaacctacaaccaagggagagcaaacgcatttgtaacatttcttaca attcctaaagggtccacatcaataacagtaaccaatgacaacagatattgttatatgagcgttgtggtttctggtagaag actgtttagccaccaaggtgcttcaccgtcaggaacctataacgggaacggtatagaagtccaataccgtaaatcaggac cagagaagatacacatcataggccctactaccagggatctccaagttcaggtccttggatttgggaatataaaacaccct tttcaatcgtccgctgactgccgtgacacggtcaattgtcctgactatggtgcagacgtgtgcacagcatatgctggttg gtcgtctacacactgtaggaagcactgtaacttgtgtggagcaggcggaaattctggatcaagttcttcttcatcatctt ctcagtcttcttcatcatcacaaacatcacactcatcagccattgaatgtaaagataaggtcaactgtaaggagtatggc gacaatgtttgttctgaatttgctcattggtcgaaagaacattgcccagttacatgcaatctctgtcaagcagacagtac atcatcaaatcatggaacaagttcgtctagtcagtcatcttcatcacagacaaccaatcagtgtgtagataaagtagcct gtgatgagtacggggatgacgtctgtgtcaagttctctgattggtcgaagaagaattgcgctaaaacctgcaaactttgt ggaggcaagtctttgtcatctgtaaatgcagcttccacaacagtggtgagcagtgacccatgtagggataaggtcaaatg tgaggaatatggtgccaatgtctgcaaggactactctgattggtcacataagaattgtgcacgccattgcaaattctgcc aaccatgtacagatatgaacattaccagtctacaatcattgcttactgtgatttttgtgtcgtacttactgaaaattgtt gctaaaagtgatggaaaatttcctactgttcccctataa |
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Protein
| Protein ID | pfu_aug1.0_1222.1_43944.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1222.1_43944.t1 MDDIKVYIDTKLGRKLAELEDHHCVVVNKYDNGTESKHSCDSMGLCHHHGYIKGKNYSSVAVSTCDGLHGVLSTGDHDLY IQPVKDHHVQFTTPYLNSSDSSKSPHTSAPNTSRPQQSNTAHLIYRRQAKKQFCAHTGEHDADKWRLDSSDDEHLRQRRS TKQHLKMKVVVAPDTYKYHGGDTERFITTVMNMSFGCDGHLGSQVRFDNCGECGGTGRGCNQHSGTYNQGRANAFVTFLT IPKGSTSITVTNDNRYCYMSVVVSGRRLFSHQGASPSGTYNGNGIEVQYRKSGPEKIHIIGPTTRDLQVQVLGFGNIKHP FQSSADCRDTVNCPDYGADVCTAYAGWSSTHCRKHCNLCGAGGNSGSSSSSSSSQSSSSSQTSHSSAIECKDKVNCKEYG DNVCSEFAHWSKEHCPVTCNLCQADSTSSNHGTSSSSQSSSSQTTNQCVDKVACDEYGDDVCVKFSDWSKKNCAKTCKLC GGKSLSSVNAASTTVVSSDPCRDKVKCEEYGANVCKDYSDWSHKNCARHCKFCQPCTDMNITSLQSLLTVIFVSYLLKIV AKSDGKFPTVPL |
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