Gene
| Gene Model ID | pfu_aug1.0_1222.1_43945 |
|---|---|
| Locus | scaffold1222.1 : 29189 ... 45805 : - |
| To GenomeBrowser | scaffold1222.1:29189..45805 |
| Genes list of scaffold | scaffold1222.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1222.1_43945.t1 | 3 | 1 | DUF3337 | 41 | 100 | 3.0e-24 | 86.0 | 2.2e-14 | 3.3e-10 | 39.8 |
| pfu_aug1.0_1222.1_43945.t1 | 3 | 2 | DUF3337 | 101 | 154 | 3.0e-24 | 86.0 | 0.00014 | 2.1 | 7.6 |
| pfu_aug1.0_1222.1_43945.t1 | 3 | 3 | DUF3337 | 155 | 219 | 3.0e-24 | 86.0 | 2.1e-13 | 3.1e-09 | 36.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1222.1_43945.t1 | gi|339238813|ref|XP_003380961.1| | WD domain, G-beta repeat-containing domain protein [Trichinella spiralis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1222.1_43945.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1222.1_43945.t1 atgccgttacagaaagtaagtgctttatcgtccagagattatgacaacgacaatttaaaacccctctactcacaaccaga atacactataaaaggtggatcaagcatacgacagtactacgtcctcaatgacaaacgtcacatactgaccaaagacaccg atgacaatgttgcattatgggatgtgctaacggctagaaaagtagaagatctaaagaaagtggactttgaagaacagata aggaaattgttcaagatggtgtatgtacctaactggttcactgtggatcttaaaacaggggtcaaagtgaacatgggcca gcagttattacaagctttattggaacactggccaaaacatcatacatatgagtctcaagacggtatgaatggtatgatgg agaatggtgatggtgcaccattttttacagtaccaggacacactccggtcatattctgagataggttatcagccagtgat atgatacaagtgagaaaagtcatagaacatgtgtacgagaaagtcttaggtcagggatctgaaaacggctcccagaatgc atctggaggaagtcaggaacgagaggaaagtgaaaaagaggctacagacttatcatcaatagctgaagagaaagtagaat tattgtgtaacgatcagtccgatgatgacgtcatacatgatgtcatacttgcagttggatggctttctgacctgtctaga taa |
|
Protein
| Protein ID | pfu_aug1.0_1222.1_43945.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1222.1_43945.t1 MPLQKVSALSSRDYDNDNLKPLYSQPEYTIKGGSSIRQYYVLNDKRHILTKDTDDNVALWDVLTARKVEDLKKVDFEEQI RKLFKMVYVPNWFTVDLKTGVKVNMGQQLLQALLEHWPKHHTYESQDGMNGMMENGDGAPFFTVPGHTPVIFXDRLSASD MIQVRKVIEHVYEKVLGQGSENGSQNASGGSQEREESEKEATDLSSIAEEKVELLCNDQSDDDVIHDVILAVGWLSDLSR |
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