Gene
| Gene Model ID | pfu_aug1.0_12229.1_53798 |
|---|---|
| Locus | scaffold12229.1 : 11366 ... 17521 : + |
| To GenomeBrowser | scaffold12229.1:11366..17521 |
| Genes list of scaffold | scaffold12229.1 |
| Synonym | pfu_aug2.0_270.1_00532 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12229.1_53798.t1 | 1 | 1 | DDE_Tnp_IS1595 | 140 | 241 | 2.4e-13 | 50.1 | 2.3e-17 | 3.3e-13 | 49.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12229.1_53798.t1 | gi|348690971|gb|EGZ30785.1| | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_12229.1_53798.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12229.1_53798.t1 atgaggatggacgtttttacattcttttcttcggtcgctaacaatgccgacgccattcgatttccccgcggtaaaggact tctgaagcggggggaagtactaatatccttgcagaatttttggtgcagtcagatccgtatgcagaccaagacggatggta acatgtttctgtttcgatgcagccactgtcgcaagaaatattctctccgtgaggattccttctttgctggcaaccatcta gcgctacgaatatgtataaccattatgtatttcttcgcgctagagatcctgctcggaacaatgcagaccgtgcttcctgg ccagctttctcgtactgcgatggtcgactggctcaatttctgtcgagagatttgcagtgctgctctaatcagaagatcta ttatcctgggaggtcaaggtgagattgttgagatagatgagtccaaatggggtagttttcgtaagtatagtcgtggatca gtcaggaatgaagggggaccatggattttcggaatgatcgaacgaaaagggcgttttgtcgtttggagcgttcaggaccg aaccaaggccacccttcagcctttgattctatgcaacacggtaccaggacccaccatctactcggacgaatgggccctgt gcgccaatctgacttccattggatacactcataggacggtgaaacacccggagaacttcgtagctgtggatgggcctaca atgctactagcttctatttgcattcgcaaatcaagttaa |
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Protein
| Protein ID | pfu_aug1.0_12229.1_53798.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12229.1_53798.t1 MRMDVFTFFSSVANNADAIRFPRGKGLLKRGEVLISLQNFWCSQIRMQTKTDGNMFLFRCSHCRKKYSLREDSFFAGNHL ALRICITIMYFFALEILLGTMQTVLPGQLSRTAMVDWLNFCREICSAALIRRSIILGGQGEIVEIDESKWGSFRKYSRGS VRNEGGPWIFGMIERKGRFVVWSVQDRTKATLQPLILCNTVPGPTIYSDEWALCANLTSIGYTHRTVKHPENFVAVDGPT MLLASICIRKSS |
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